Minc05804 (Meloidogyne incognita)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 Minc05804 T159540_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.842 0.842
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Minc05804 C2HC ZF 25 52
Minc05804 C2HC ZF 71 99

Links

Other C2HC ZF family TFs
Other Meloidogyne incognita TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_22234 Aegilops tauschii F775_22234 N 0.000
MLOC_19052 Hordeum vulgare MLOC_19052 N 0.000
OBART01G04450 Oryza barthii OBART01G04450 N 0.000
OB01G14200 Oryza brachyantha OB01G14200 N 0.000
ORGLA01G0040700 Oryza glaberrima ORGLA01G0040700 I 0.000
BGIOSGA002858 Oryza indica BGIOSGA002858 I 0.000
ORUFI01G04650 Oryza rufipogon ORUFI01G04650 N 0.000
ORUFI01G04660 Oryza rufipogon ORUFI01G04660 I 0.000
Pavir.J24104 Panicum virgatum Pavir.J24104 N 0.000
Pavir.Eb00461 Panicum virgatum Pavir.Eb00461 N 0.000
Pavir.Eb00460 Panicum virgatum Pavir.Eb00460 I 0.000
Pavir.Ea00486 Panicum virgatum Pavir.Ea00486 I 0.000
Si002550m.g Setaria italica Si002550m.g I 0.000
Si002595m.g Setaria italica Si002595m.g N 0.000
Sb05g001215 Sorghum bicolor Sb05g001215 N 0.000
Sb03g004600 Sorghum bicolor Sb03g004600 I 0.000
TRAES3BF059600070CFD_g Triticum aestivum TRAES3BF059600070CFD_g N 0.000
TRIUR3_34833 Triticum urartu TRIUR3_34833 N 0.000
GRMZM2G143274 Zea mays GRMZM2G143274 N 0.000
GRMZM2G052377 Zea mays GRMZM2G052377 I 0.000