CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TIGD6
(
Procavia capensis
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04218 (CENP-B_N)
IPR006695
ENSPCAG00000016618
T161650_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TIGD6
M01205_2.00
Monodelphis domestica
NWVCRWANN
NNTWYGBWN
PBM
Lambert et al.(2019)
pTH11462
0.849
0.849
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000015558
CENPB
5
57
GNKRQQFSLEEKMKVVEAIDSGWRKGDVAKEFDITPSALSTFLKDRTKFEEKV
Links
Other
CENPB
family TFs
Other
Procavia capensis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Da01516
Panicum virgatum
Pavir.Da01516
N
Pavir.J20053
Panicum virgatum
Pavir.J20053
N
Si021654m.g
Setaria italica
Si021654m.g
N
Sb09g021520
Sorghum bicolor
Sb09g021520
N
GRMZM2G096759
Zea mays
GRMZM2G096759
N
GRMZM2G130784
Zea mays
GRMZM2G130784
N
GRMZM5G884544
Zea mays
GRMZM5G884544
N