ENSOGAG00000027987 (Otolemur garnettii)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSOGAG00000027987 T164705_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.758 0.758
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.758 0.758
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.758 0.758
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000016830 CSD 50 117

Links

Other CSD family TFs
Other Otolemur garnettii TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11596 Aegilops tauschii F775_11596 I 0.000
F775_30123 Aegilops tauschii F775_30123 I 0.000
AMTR_s00029p00225270 Amborella trichopoda AMTR_s00029p00225270 I 0.000
AMTR_s00044p00155390 Amborella trichopoda AMTR_s00044p00155390 I 0.000
Aquca_004_00311 Aquilegia coerulea Aquca_004_00311 I 0.000
Aquca_007_00901 Aquilegia coerulea Aquca_007_00901 I 0.000
Aquca_015_00333 Aquilegia coerulea Aquca_015_00333 I 0.000
WOX14 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001881 I 0.000
WOX7 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6000438 I 0.000
WOX10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001761 I 0.000
HB-4 Arabidopsis lyrata scaffold_700564.1 I 0.000
WOX14 Arabidopsis thaliana AT1G20700 I 0.000
WOX10 Arabidopsis thaliana AT1G20710 I 0.000
WOX13 Arabidopsis thaliana AT4G35550 D 0.000
WOX7 Arabidopsis thaliana AT5G05770 I 0.000
Bostr.13129s0396 Boechera stricta Bostr.13129s0396 I 0.000
Bostr.3717s0001 Boechera stricta Bostr.3717s0001 I 0.000
Bostr.7128s0661 Boechera stricta Bostr.7128s0661 I 0.000
Bostr.7867s1413 Boechera stricta Bostr.7867s1413 I 0.000
BRADI2G53390 Brachypodium distachyon BRADI2G53390 I 0.000
BRADI2G54590 Brachypodium distachyon BRADI2G54590 I 0.000
BRADI2G55270 Brachypodium distachyon BRADI2G55270 I 0.000
Bo09314s010 Brassica oleracea Bo09314s010 I 0.000
Bo1g006370 Brassica oleracea Bo1g006370 I 0.000
Bo2g007050 Brassica oleracea Bo2g007050 I 0.000
Bo3g155580 Brassica oleracea Bo3g155580 I 0.000
Bo5g030590 Brassica oleracea Bo5g030590 I 0.000
Bo7g061410 Brassica oleracea Bo7g061410 I 0.000
Bo7g117480 Brassica oleracea Bo7g117480 I 0.000
Bo9g176920 Brassica oleracea Bo9g176920 I 0.000
Bra009132 Brassica rapa Bra009132 I 0.000
Bra010531 Brassica rapa Bra010531 I 0.000
Bra011623 Brassica rapa Bra011623 I 0.000
Bra017720 Brassica rapa Bra017720 I 0.000
Bra025839 Brassica rapa Bra025839 I 0.000
Bra028749 Brassica rapa Bra028749 I 0.000
PK07880.1 Cannabis sativa PK07880.1 I 0.000
PK12498.1 Cannabis sativa PK12498.1 I 0.000
PK14252.1 Cannabis sativa PK14252.1 I 0.000
Cagra.2350s0096 Capsella grandiflora Cagra.2350s0096 I 0.000
Cagra.5131s0005 Capsella grandiflora Cagra.5131s0005 I 0.000
Cagra.6160s0025 Capsella grandiflora Cagra.6160s0025 I 0.000
Cagra.6160s0026 Capsella grandiflora Cagra.6160s0026 I 0.000
Carubv10003830m.g Capsella rubella Carubv10003830m.g I 0.000
Carubv10005217m.g Capsella rubella Carubv10005217m.g I 0.000
Carubv10010349m.g Capsella rubella Carubv10010349m.g I 0.000
Carubv10012447m.g Capsella rubella Carubv10012447m.g I 0.000
evm.TU.supercontig_19.201 Carica papaya evm.TU.supercontig_19.201 I 0.000
evm.TU.supercontig_26.173 Carica papaya evm.TU.supercontig_26.173 I 0.000
evm.TU.supercontig_6.368 Carica papaya evm.TU.supercontig_6.368 I 0.000
Ca_04823 Cicer arietinum Ca_04823 I 0.000
Ca_10316 Cicer arietinum Ca_10316 I 0.000
Ca_18623 Cicer arietinum Ca_18623 I 0.000
Ca_19383 Cicer arietinum Ca_19383 I 0.000
Ca_19386 Cicer arietinum Ca_19386 I 0.000
Cla006686 Citrullus lanatus Cla006686 I 0.000
Cla009089 Citrullus lanatus Cla009089 I 0.000
Cla023819 Citrullus lanatus Cla023819 I 0.000
Ciclev10002354m.g Citrus clementina Ciclev10002354m.g I 0.000
Ciclev10026199m.g Citrus clementina Ciclev10026199m.g I 0.000
Ciclev10033868m.g Citrus clementina Ciclev10033868m.g I 0.000
orange1.1g022516m.g Citrus sinensis orange1.1g022516m.g I 0.000
orange1.1g026809m.g Citrus sinensis orange1.1g026809m.g I 0.000
orange1.1g036802m.g Citrus sinensis orange1.1g036802m.g I 0.000
Cucsa.136500 Cucumis sativus Cucsa.136500 I 0.000
Cucsa.272210 Cucumis sativus Cucsa.272210 I 0.000
Cucsa.323040 Cucumis sativus Cucsa.323040 I 0.000
Eucgr.G03036 Eucalyptus grandis Eucgr.G03036 I 0.000
Eucgr.I02222 Eucalyptus grandis Eucgr.I02222 I 0.000
Thhalv10008824m.g Eutrema salsugineum Thhalv10008824m.g I 0.000
Thhalv10009917m.g Eutrema salsugineum Thhalv10009917m.g I 0.000
Thhalv10015842m.g Eutrema salsugineum Thhalv10015842m.g I 0.000
Thhalv10025989m.g Eutrema salsugineum Thhalv10025989m.g I 0.000
gene13035-v1.0-hybrid Fragaria vesca gene13035-v1.0-hybrid I 0.000
gene20491-v1.0-hybrid Fragaria vesca gene20491-v1.0-hybrid I 0.000
gene20925-v1.0-hybrid Fragaria vesca gene20925-v1.0-hybrid I 0.000
gene32456-v1.0-hybrid Fragaria vesca gene32456-v1.0-hybrid I 0.000
GLYMA02G10410 Glycine max GLYMA02G10410 I 0.000
GLYMA02G42200 Glycine max GLYMA02G42200 I 0.000
GLYMA04G01830 Glycine max GLYMA04G01830 I 0.000
GLYMA06G01940 Glycine max GLYMA06G01940 I 0.000
GLYMA10G43580 Glycine max GLYMA10G43580 I 0.000
GLYMA11G34990 Glycine max GLYMA11G34990 I 0.000
GLYMA18G03350 Glycine max GLYMA18G03350 I 0.000
GLYMA18G52491 Glycine max GLYMA18G52491 I 0.000
GLYMA20G23220 Glycine max GLYMA20G23220 I 0.000
Gorai.001G199200 Gossypium raimondii Gorai.001G199200 I 0.000
Gorai.003G002200 Gossypium raimondii Gorai.003G002200 I 0.000
Gorai.004G038300 Gossypium raimondii Gorai.004G038300 I 0.000
Gorai.007G372000 Gossypium raimondii Gorai.007G372000 I 0.000
Gorai.011G283000 Gossypium raimondii Gorai.011G283000 I 0.000
MLOC_56124 Hordeum vulgare MLOC_56124 I 0.000
MLOC_74758 Hordeum vulgare MLOC_74758 I 0.000
LPERR01G30370 Leersia perrieri LPERR01G30370 I 0.000
LPERR01G32330 Leersia perrieri LPERR01G32330 I 0.000
Lus10016026.g Linum usitatissimum Lus10016026.g I 0.000
Lus10023561.g Linum usitatissimum Lus10023561.g I 0.000
Lus10028271.g Linum usitatissimum Lus10028271.g I 0.000
Lus10038480.g Linum usitatissimum Lus10038480.g I 0.000
Lus10040219.g Linum usitatissimum Lus10040219.g I 0.000
Lus10040447.g Linum usitatissimum Lus10040447.g I 0.000
chr1.CM0113.620.nc Lotus japonicus chr1.CM0113.620.nc I 0.000
chr5.CM0180.70.nc Lotus japonicus chr5.CM0180.70.nc I 0.000
LjSGA_103126.1 Lotus japonicus LjSGA_103126.1 I 0.000
LjT41B11.90.nd Lotus japonicus LjT41B11.90.nd I 0.000
MDP0000213910 Malus domestica MDP0000213910 I 0.000
MDP0000224466 Malus domestica MDP0000224466 I 0.000
MDP0000304650 Malus domestica MDP0000304650 I 0.000
MDP0000316517 Malus domestica MDP0000316517 I 0.000
MDP0000600720 Malus domestica MDP0000600720 I 0.000
MDP0000851699 Malus domestica MDP0000851699 I 0.000
cassava23423.valid.m1 Manihot esculenta cassava23423.valid.m1 I 0.000
cassava26880.m1 Manihot esculenta cassava26880.m1 I 0.000
cassava39214.m1 Manihot esculenta cassava39214.m1 I 0.000
cassava4109.m1 Manihot esculenta cassava4109.m1 I 0.000
MTR_1g115315 Medicago truncatula MTR_1g115315 I 0.000
MTR_3g115620 Medicago truncatula MTR_3g115620 I 0.000
MTR_5g081990 Medicago truncatula MTR_5g081990 I 0.000
MTR_7g023810 Medicago truncatula MTR_7g023810 I 0.000
estExt_fgenesh1_pg.C_90244 Micromonas pusilla estExt_fgenesh1_pg.C_90244 I 0.000
EuGene.0600010372 Micromonas sp RCC299 EuGene.0600010372 I 0.000
mgf006573m Mimulus guttatus mgf006573m I 0.000
mgf008378m Mimulus guttatus mgf008378m I 0.000
mgf023746m Mimulus guttatus mgf023746m I 0.000
mgf024314m Mimulus guttatus mgf024314m N 0.000
GSMUA_Achr10G07260_001 Musa acuminata GSMUA_Achr10G07260_001 I 0.000
GSMUA_Achr1G17980_001 Musa acuminata GSMUA_Achr1G17980_001 I 0.000
GSMUA_Achr3G09460_001 Musa acuminata GSMUA_Achr3G09460_001 I 0.000
GSMUA_Achr3G14840_001 Musa acuminata GSMUA_Achr3G14840_001 I 0.000
GSMUA_Achr4G25530_001 Musa acuminata GSMUA_Achr4G25530_001 I 0.000
GSMUA_Achr5G11080_001 Musa acuminata GSMUA_Achr5G11080_001 I 0.000
GSMUA_Achr7G04050_001 Musa acuminata GSMUA_Achr7G04050_001 I 0.000
GSMUA_Achr7G14860_001 Musa acuminata GSMUA_Achr7G14860_001 I 0.000
GSMUA_AchrUn_randomG18610_001 Musa acuminata GSMUA_AchrUn_randomG18610_001 I 0.000
OBART01G35170 Oryza barthii OBART01G35170 I 0.000
OBART01G37660 Oryza barthii OBART01G37660 I 0.000
OB01G44030 Oryza brachyantha OB01G44030 I 0.000
OB01G46390 Oryza brachyantha OB01G46390 I 0.000
ORGLA01G0290300 Oryza glaberrima ORGLA01G0290300 I 0.000
ORGLA01G0314800 Oryza glaberrima ORGLA01G0314800 I 0.000
OGLUM01G41580 Oryza glumaepatula OGLUM01G41580 I 0.000
BGIOSGA000469 Oryza indica BGIOSGA000469 I 0.000
BGIOSGA004695 Oryza indica BGIOSGA004695 I 0.000
OLONG_007155 Oryza longistaminata OLONG_007155 I 0.000
OLONG_016784 Oryza longistaminata OLONG_016784 I 0.000
OMERI01G32310 Oryza meridionalis OMERI01G32310 I 0.000
OMERI01G34630 Oryza meridionalis OMERI01G34630 I 0.000
ONIVA01G14610 Oryza nivara ONIVA01G14610 I 0.000
ONIVA01G40180 Oryza nivara ONIVA01G40180 I 0.000
OPUNC01G34140 Oryza punctata OPUNC01G34140 I 0.000
OPUNC01G36520 Oryza punctata OPUNC01G36520 I 0.000
ORUFI01G38500 Oryza rufipogon ORUFI01G38500 I 0.000
ORUFI01G41010 Oryza rufipogon ORUFI01G41010 I 0.000
WOX8 Oryza sativa OS01G0818400 I 0.000
WOX9 Oryza sativa OS01G0854500 I 0.000
Pavir.Ea03245 Panicum virgatum Pavir.Ea03245 I 0.000
Pavir.Ea03339 Panicum virgatum Pavir.Ea03339 I 0.000
Pavir.Ea03790 Panicum virgatum Pavir.Ea03790 I 0.000
Pavir.Eb03552 Panicum virgatum Pavir.Eb03552 I 0.000
Pavir.Eb03715 Panicum virgatum Pavir.Eb03715 I 0.000
Pavir.J34036 Panicum virgatum Pavir.J34036 I 0.000
PDK_20s1363982g001 Phoenix dactylifera PDK_20s1363982g001 I 0.000
PDK_20s1408301g001 Phoenix dactylifera PDK_20s1408301g001 I 0.000
fgenesh1_pg.scaffold_217000007 Physcomitrella patens fgenesh1_pg.scaffold_217000007 I 0.000
gw1.224.39.1 Physcomitrella patens gw1.224.39.1 I 0.000
gw1.29.10.1 Physcomitrella patens gw1.29.10.1 I 0.000
POPTR_0002s00980 Populus trichocarpa POPTR_0002s00980 I 0.000
HB-4 Populus trichocarpa POPTR_0005s10480 I 0.000
POPTR_0005s27410 Populus trichocarpa POPTR_0005s27410 I 0.000
POPTR_0010s19950 Populus trichocarpa POPTR_0010s19950 I 0.000
Pm018890 Prunus mume Pm018890 I 0.000
Pm022951 Prunus mume Pm022951 I 0.000
Pm026793 Prunus mume Pm026793 I 0.000
PRUPE_ppa011225mg Prunus persica PRUPE_ppa011225mg I 0.000
PRUPE_ppa020183mg Prunus persica PRUPE_ppa020183mg I 0.000
PRUPE_ppa021400mg Prunus persica PRUPE_ppa021400mg I 0.000
29669.m000805 Ricinus communis 29669.m000805 I 0.000
29830.m001452 Ricinus communis 29830.m001452 I 0.000
30170.m014389 Ricinus communis 30170.m014389 I 0.000
SapurV1A.0016s0590 Salix purpurea SapurV1A.0016s0590 I 0.000
SapurV1A.0061s0020 Salix purpurea SapurV1A.0061s0020 I 0.000
SapurV1A.0266s0300 Salix purpurea SapurV1A.0266s0300 I 0.000
SapurV1A.1240s0080 Salix purpurea SapurV1A.1240s0080 I 0.000
SELMODRAFT_115439 Selaginella moellendorffii SELMODRAFT_115439 I 0.000
SELMODRAFT_123325 Selaginella moellendorffii SELMODRAFT_123325 I 0.000
SELMODRAFT_404178 Selaginella moellendorffii SELMODRAFT_404178 I 0.000
SELMODRAFT_407157 Selaginella moellendorffii SELMODRAFT_407157 I 0.000
SELMODRAFT_438787 Selaginella moellendorffii SELMODRAFT_438787 I 0.000
SELMODRAFT_451353 Selaginella moellendorffii SELMODRAFT_451353 I 0.000
SELMODRAFT_451355 Selaginella moellendorffii SELMODRAFT_451355 I 0.000
SELMODRAFT_84885 Selaginella moellendorffii SELMODRAFT_84885 I 0.000
Si002508m.g Setaria italica Si002508m.g I 0.000
Si002900m.g Setaria italica Si002900m.g I 0.000
Solyc02g082670.2 Solanum lycopersicum Solyc02g082670.2 I 0.000
Solyc03g096300.2 Solanum lycopersicum Solyc03g096300.2 I 0.000
PGSC0003DMG400001565 Solanum tuberosum PGSC0003DMG400001565 I 0.000
PGSC0003DMG400020731 Solanum tuberosum PGSC0003DMG400020731 I 0.000
Sb03g038080 Sorghum bicolor Sb03g038080 I 0.000
Sb03g039380 Sorghum bicolor Sb03g039380 I 0.000
Sb03g040210 Sorghum bicolor Sb03g040210 I 0.000
TCM_000062 Theobroma cacao TCM_000062 I 0.000
TCM_034409 Theobroma cacao TCM_034409 I 0.000
TCM_042593 Theobroma cacao TCM_042593 I 0.000
Traes_3AL_D0053C177 Triticum aestivum Traes_3AL_D0053C177 I 0.000
Traes_3AS_9079D6B71 Triticum aestivum Traes_3AS_9079D6B71 I 0.000
TRAES3BF057600060CFD_g Triticum aestivum TRAES3BF057600060CFD_g I 0.000
TRAES3BF091200090CFD_g Triticum aestivum TRAES3BF091200090CFD_g I 0.000
TRAES3BF091200100CFD_g Triticum aestivum TRAES3BF091200100CFD_g I 0.000
Traes_3DL_6B1815F7D Triticum aestivum Traes_3DL_6B1815F7D I 0.000
Traes_3DS_97BBFFA03 Triticum aestivum Traes_3DS_97BBFFA03 I 0.000
Traes_5BS_439DB52FE Triticum aestivum Traes_5BS_439DB52FE I 0.000
Traes_5DS_903A67B97 Triticum aestivum Traes_5DS_903A67B97 I 0.000
TRIUR3_23636 Triticum urartu TRIUR3_23636 I 0.000
TRIUR3_26391 Triticum urartu TRIUR3_26391 I 0.000
VIT_04s0044g00150 Vitis vinifera VIT_04s0044g00150 I 0.000
VIT_04s0044g00160 Vitis vinifera VIT_04s0044g00160 I 0.000
VIT_13s0019g03460 Vitis vinifera VIT_13s0019g03460 I 0.000
VIT_18s0122g01140 Vitis vinifera VIT_18s0122g01140 I 0.000
GRMZM2G038252 Zea mays GRMZM2G038252 D 0.000
GRMZM2G069274 Zea mays GRMZM2G069274 I 0.000
GRMZM2G108933 Zea mays GRMZM2G108933 I 0.000
GRMZM2G116063 Zea mays GRMZM2G116063 I 0.000
GRMZM2G339751 Zea mays GRMZM2G339751 I 0.000
GRMZM2G478396 Zea mays GRMZM2G478396 I 0.000
GRMZM5G805026 Zea mays GRMZM5G805026 I 0.000