Pvit_08747 (Pogona vitticeps)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 Pvit_08747 T166311_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rbpjl
M09519_2.00 		Mus musculus
NDTTCCCABR
YVTGGGAAHN		 Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_08747 CSL 176 313

Links

Other CSL family TFs
Other Pogona vitticeps TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N
scaffold_200168.1 Arabidopsis lyrata scaffold_200168.1 N
AT1G63490 Arabidopsis thaliana AT1G63490 N
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N
Bo9g029100 Brassica oleracea Bo9g029100 N
PK05702.1 Cannabis sativa PK05702.1 N
Cagra.2104s0024 Capsella grandiflora Cagra.2104s0024 N
Cla011637 Citrullus lanatus Cla011637 N
orange1.1g000212m.g Citrus sinensis orange1.1g000212m.g N
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N
Thhalv10023217m.g Eutrema salsugineum Thhalv10023217m.g N
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N
GLYMA11G02580 Glycine max GLYMA11G02580 N
GLYMA01G42890 Glycine max GLYMA01G42890 N
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N
Lus10008495.g Linum usitatissimum Lus10008495.g N
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N
MDP0000158904 Malus domestica MDP0000158904 N
MDP0000162827 Malus domestica MDP0000162827 N
MDP0000286412 Malus domestica MDP0000286412 N
MDP0000287313 Malus domestica MDP0000287313 N
cassava14944.m1 Manihot esculenta cassava14944.m1 N
MTR_5g010300 Medicago truncatula MTR_5g010300 N
Pm023825 Prunus mume Pm023825 N
30190.m011218 Ricinus communis 30190.m011218 N
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N
TCM_016246 Theobroma cacao TCM_016246 N