CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0000455001
(
Heligmosomoides bakeri
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
HPBE_0000455001
T169828_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-9
M00661_2.00
Caenorhabditis elegans
ACCTTT
AAAGGT
PBM
Narasimhan et al.(2015)
pTH8999
0.908
0.733
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0000455001-mRNA-1
DM
2
46
KRLTCRKCEGHGFISVLKGHAAVCPFNECSCERCSSVMSMRANAL
Links
Other
DM
family TFs
Other
Heligmosomoides bakeri
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA004880
Anopheles culicifacies
ACUA004880
N
ACUA021303
Anopheles culicifacies
ACUA021303
N
ADIR002704
Anopheles dirus
ADIR002704
N
AFAF019450
Anopheles farauti
AFAF019450
N
AFUN009337
Anopheles funestus
AFUN009337
N
AGAP001073
Anopheles gambiae
AGAP001073
N
AMIN008233
Anopheles minimus
AMIN008233
N
CpipJ_CPIJ011789
Culex pipiens
CpipJ_CPIJ011789
N
CPIJ011789
Culex quinquefasciatus
CPIJ011789
N