GSMUA_Achr7G02220_001 (Musa acuminata)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 GSMUA_Achr7G02220_001 T173173_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2FE
M01958_2.00 		Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD		 PBM
Weirauch et al.(2014)
pTH8176 		0.735 0.735
E2FE
M06873_2.00 		Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA		 Dap-seq
OMalley et al.(2016)
DEL1_col_a 		0.735 0.735
E2FE
M06874_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL1_colamp_a 		0.735 0.735
E2FD
M06875_2.00 		Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH		 Dap-seq
OMalley et al.(2016)
DEL2_col_a 		0.654 0.654
E2FD
M06876_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL2_colamp_a 		0.654 0.654
E2FD
M10442_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L1_Q2 		0.654 0.654
E2FD
M10443_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L_Q2 		0.654 0.654
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.559 0.559
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.559 0.559
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.559 0.559
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.559 0.559
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.559 0.559
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.559 0.559
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.544 0.544
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.544 0.544
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.544 0.544
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr7P02220_001 E2F 21 85
GSMUA_Achr7P02220_001 E2F 165 243

Links

Other E2F family TFs
Other Musa acuminata TFs

317 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I 0.000
AAEL014322 Aedes aegypti AAEL014322 I 0.000
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I 0.000
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I 0.000
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I 0.000
AALB008334 Anopheles albimanus AALB008334 I 0.000
AARA002094 Anopheles arabiensis AARA002094 I 0.000
AATE018889 Anopheles atroparvus AATE018889 I 0.000
ACHR010174 Anopheles christyi ACHR010174 I 0.000
ACOM034431 Anopheles coluzzii ACOM034431 I 0.000
ACUA006973 Anopheles culicifacies ACUA006973 I 0.000
ADAC002492 Anopheles darlingi ADAC002492 I 0.000
ADIR010448 Anopheles dirus ADIR010448 I 0.000
AEPI006062 Anopheles epiroticus AEPI006062 I 0.000
AFAF001067 Anopheles farauti AFAF001067 I 0.000
AFUN011634 Anopheles funestus AFUN011634 I 0.000
AMAM006832 Anopheles maculatus AMAM006832 I 0.000
AMEM001613 Anopheles merus AMEM001613 I 0.000
AMIN003460 Anopheles minimus AMIN003460 I 0.000
AQUA000514 Anopheles quadriannulatus AQUA000514 I 0.000
ASTEI05690 Anopheles stephensi ASTEI05690 I 0.000
GB55306 Apis mellifera GB55306 I 0.000
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I 0.000
ASU_01867 Ascaris suum ASU_01867 I 0.000
ENSAMXG00000000425 Astyanax mexicanus ENSAMXG00000000425 I 0.000
BGLB008104 Biomphalaria glabrata BGLB008104 N 0.000
fgenesh2_pg.scaffold_226000031 Branchiostoma floridae fgenesh2_pg.scaffold_226000031 I 0.000
fgenesh2_pg.scaffold_226000032 Branchiostoma floridae fgenesh2_pg.scaffold_226000032 I 0.000
fgenesh2_pg.scaffold_29000123 Branchiostoma floridae fgenesh2_pg.scaffold_29000123 I 0.000
Bm1750 Brugia malayi Bm1750 I 0.000
CBN11281 Caenorhabditis brenneri CBN11281 I 0.000
CBG13470 Caenorhabditis briggsae CBG13470 I 0.000
hlh-1 Caenorhabditis elegans WBGene00001948 D 0.000
CJA13327 Caenorhabditis japonica CJA13327 I 0.000
CRE17301 Caenorhabditis remanei CRE17301 I 0.000
Cflo_03885--XP_001120527.1_APIME Camponotus floridanus Cflo_03885--XP_001120527.1_APIME I 0.000
CapteG36721 Capitella teleta CapteG36721 I 0.000
CLEC002330 Cimex lectularius CLEC002330 I 0.000
csin100742 Clonorchis sinensis csin100742 I 0.000
CpipJ_CPIJ005345 Culex pipiens CpipJ_CPIJ005345 I 0.000
CPIJ005345 Culex quinquefasciatus CPIJ005345 I 0.000
myf6 Danio rerio ENSDARG00000029830 I 0.000
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.000
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I 0.000
Myf6 Dipodomys ordii ENSDORG00000015435 I 0.000
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I 0.000
GF18746 Drosophila ananassae FBgn0095763 I 0.000
GG12413 Drosophila erecta FBgn0104701 I 0.000
GH13904 Drosophila grimshawi FBgn0121380 I 0.000
nau Drosophila melanogaster FBgn0002922 D 0.000
GI24830 Drosophila mojavensis FBgn0147551 I 0.000
GL13832 Drosophila persimilis FBgn0151437 I 0.000
GA10192 Drosophila pseudoobscura FBgn0070251 I 0.000
GM23547 Drosophila sechellia FBgn0178413 I 0.000
GD18361 Drosophila simulans FBgn0189889 I 0.000
GJ24474 Drosophila virilis FBgn0211554 I 0.000
GK22777 Drosophila willistoni FBgn0224749 I 0.000
GE23932 Drosophila yakuba FBgn0241076 I 0.000
ECANG7_02004 Echinococcus canadensis ECANG7_02004 I 0.000
EmuJ_001053100 Echinococcus multilocularis EmuJ_001053100 I 0.000
ECPE_0001678601 Echinostoma caproni ECPE_0001678601 I 0.000
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I 0.000
D915_09890 Fasciola hepatica D915_09890 I 0.000
HCOI02168200 Haemonchus contortus HCOI02168200 I 0.000
Hsal_05065--XP_001120527.1_APIME Harpegnathos saltator Hsal_05065--XP_001120527.1_APIME I 0.000
HelroG188369 Helobdella robusta HelroG188369 N 0.000
HmN_000553800 Hymenolepis microstoma HmN_000553800 I 0.000
HNAJ_0001324201 Hymenolepis nana HNAJ_0001324201 I 0.000
ENSLACG00000010731 Latimeria chalumnae ENSLACG00000010731 I 0.000
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.000
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I 0.000
LOAG_16988 Loa loa LOAG_16988 I 0.000
LotgiG99982 Lottia gigantea LotgiG99982 I 0.000
LCUP007809 Lucilia cuprina LCUP007809 I 0.000
LLOJ004446 Lutzomyia longipalpis LLOJ004446 I 0.000
MCOS_0000168001 Mesocestoides corti MCOS_0000168001 I 0.000
ENSMPUG00000011508 Mustela putorius furo ENSMPUG00000011508 I 0.000
NV10294 Nasonia vitripennis NV10294 I 0.000
NECAME_14163 Necator americanus NECAME_14163 I 0.000
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I 0.000
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I 0.000
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I 0.000
WBGene00247572 Onchocerca volvulus WBGene00247572 I 0.000
T265_10140 Opisthorchis viverrini T265_10140 I 0.000
PHUM424120 Pediculus humanus PHUM424120 I 0.000
MYOG Pteropus vampyrus ENSPVAG00000013141 I 0.000
RPRC009735 Rhodnius prolixus RPRC009735 I 0.000
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I 0.000
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I 0.000
SSLN_0000613901 Schistocephalus solidus SSLN_0000613901 I 0.000
A_07871 Schistosoma haematobium A_07871 I 0.000
Sjc_0011830 Schistosoma japonicum Sjc_0011830 I 0.000
Smp_167400 Schistosoma mansoni Smp_167400 I 0.000
SMU15001149 Schmidtea mediterranea SMU15001149 I 0.000
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I 0.000
SPER_0001779001 Spirometra erinaceieuropaei SPER_0001779001 I 0.000
SPER_0002215301 Spirometra erinaceieuropaei SPER_0002215301 I 0.000
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I 0.000
TASK_0000583801 Taenia asiatica TASK_0000583801 I 0.000
TsM_000079400 Taenia solium TsM_000079400 I 0.000
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I 0.000
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I 0.000
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I 0.000
TC015855 Tribolium castaneum TC015855 I 0.000
D917_06339 Trichinella nativa D917_06339 I 0.000
EFV52759 Trichinella spiralis EFV52759 I 0.000
TRE_0000306101 Trichobilharzia regenti TRE_0000306101 I 0.000
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I 0.000
D918_04086 Trichuris suis D918_04086 I 0.000
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I 0.000
WUBG_05117 Wuchereria bancrofti WUBG_05117 I 0.000