Traes_6DL_90C72AE92 (Triticum aestivum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 Traes_6DL_90C72AE92 T173544_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2FE
M01958_2.00 		Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD		 PBM
Weirauch et al.(2014)
pTH8176 		0.722 0.722
E2FE
M06873_2.00 		Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA		 Dap-seq
OMalley et al.(2016)
DEL1_col_a 		0.722 0.722
E2FE
M06874_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL1_colamp_a 		0.722 0.722
E2FD
M06875_2.00 		Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH		 Dap-seq
OMalley et al.(2016)
DEL2_col_a 		0.624 0.624
E2FD
M06876_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL2_colamp_a 		0.624 0.624
E2FD
M10442_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L1_Q2 		0.624 0.624
E2FD
M10443_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L_Q2 		0.624 0.624
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.556 0.556
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.556 0.556
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.556 0.556
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.556 0.556
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.556 0.556
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.556 0.556
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.556 0.556
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.556 0.556
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.556 0.556
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6DL_90C72AE92.1 E2F 47 108
Traes_6DL_90C72AE92.1 E2F 188 267

Links

Other E2F family TFs
Other Triticum aestivum TFs

322 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSACAG00000004870 Anolis carolinensis ENSACAG00000004870 I 0.000
Afo_R006429 Aptenodytes forsteri Afo_R006429 I 0.000
CRE08474 Caenorhabditis remanei CRE08474 N 0.000
CRE31308 Caenorhabditis remanei CRE31308 N 0.000
Aan_R012851 Calypte anna Aan_R012851 I 0.000
CapteG222987 Capitella teleta CapteG222987 I 0.000
csin105615 Clonorchis sinensis csin105615 I 0.000
EmuJ_000217500 Echinococcus multilocularis EmuJ_000217500 N 0.000
ECPE_0000936301 Echinostoma caproni ECPE_0000936301 N 0.000
TTAC_0000041401 Hydatigera taeniaeformis TTAC_0000041401 N 0.000
HDID_0000136701 Hymenolepis diminuta HDID_0000136701 N 0.000
ENSLACG00000016329 Latimeria chalumnae ENSLACG00000016329 I 0.000
MCOS_0000774901 Mesocestoides corti MCOS_0000774901 N 0.000
T265_08863 Opisthorchis viverrini T265_08863 I 0.000
SCUD_0000195401 Schistosoma curassoni SCUD_0000195401 N 0.000
A_01907 Schistosoma haematobium A_01907 N 0.000
A_01406 Schistosoma haematobium A_01406 I 0.000
Smp_098780 Schistosoma mansoni Smp_098780 N 0.000
SMRZ_0002246801 Schistosoma margrebowiei SMRZ_0002246801 N 0.000
SROB_0001069101 Schistosoma rodhaini SROB_0001069101 N 0.000
TASK_0000624801 Taenia asiatica TASK_0000624801 N 0.000
TsM_001176500 Taenia solium TsM_001176500 N 0.000
TriadG17444 Trichoplax adhaerens TriadG17444 I 0.000
Tal_R007079 Tyto alba Tal_R007079 I 0.000