Bostr.6251s0027 (Boechera stricta)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Bostr.6251s0027 T173896_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		0.603 0.603
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		0.603 0.603
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.588 0.588
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.6251s0027.1.p E2F 48 131

Links

Other E2F family TFs
Other Boechera stricta TFs

531 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000000661 Ailuropoda melanoleuca ENSAMEG00000000661 I
ENSAMEG00000001865 Ailuropoda melanoleuca ENSAMEG00000001865 I
ENSAMEG00000004997 Ailuropoda melanoleuca ENSAMEG00000004997 I
ENSAMEG00000005877 Ailuropoda melanoleuca ENSAMEG00000005877 I
Alligator_sinensis_CCG005377.1 Alligator sinensis Alligator_sinensis_CCG005377.1 I
Alligator_sinensis_CCG010655.1 Alligator sinensis Alligator_sinensis_CCG010655.1 I
Alligator_sinensis_CCG014476.1 Alligator sinensis Alligator_sinensis_CCG014476.1 I
ENSAPLG00000007333 Anas platyrhynchos ENSAPLG00000007333 I
ENSAPLG00000008742 Anas platyrhynchos ENSAPLG00000008742 I
ENSAPLG00000013598 Anas platyrhynchos ENSAPLG00000013598 I
ENSACAG00000006408 Anolis carolinensis ENSACAG00000006408 I
HOXA13 Anolis carolinensis ENSACAG00000010302 I
HOXC13 Anolis carolinensis ENSACAG00000010829 I
ENSACAG00000017915 Anolis carolinensis ENSACAG00000017915 I
Afo_R003391 Aptenodytes forsteri Afo_R003391 I
Afo_R003417 Aptenodytes forsteri Afo_R003417 I
Afo_R006927 Aptenodytes forsteri Afo_R006927 I
ENSAMXG00000000621 Astyanax mexicanus ENSAMXG00000000621 I
ENSAMXG00000005151 Astyanax mexicanus ENSAMXG00000005151 I
ENSAMXG00000006875 Astyanax mexicanus ENSAMXG00000006875 I
ENSAMXG00000009345 Astyanax mexicanus ENSAMXG00000009345 I
ENSAMXG00000015950 Astyanax mexicanus ENSAMXG00000015950 I
ENSAMXG00000016994 Astyanax mexicanus ENSAMXG00000016994 I
ENSAMXG00000024685 Astyanax mexicanus ENSAMXG00000024685 I
ENSBTAP00000001222-D1 Bos grunniens ENSBTAP00000001222-D1 I
ENSBTAP00000005651-D1 Bos grunniens ENSBTAP00000005651-D1 I
ENSBTAP00000019523-D1 Bos grunniens ENSBTAP00000019523-D1 I
ENSP00000222753-D1 Bos grunniens ENSP00000222753-D1 I
HOXC13 Bos taurus ENSBTAG00000000923 I
HOXD13 Bos taurus ENSBTAG00000004313 I
HOXB13 Bos taurus ENSBTAG00000014663 I
HOXA13 Bos taurus ENSBTAG00000014735 I
Brh_R002806 Buceros rhinoceros Brh_R002806 I
Brh_R008277 Buceros rhinoceros Brh_R008277 I
Brh_R008776 Buceros rhinoceros Brh_R008776 I
HOXB13 Callithrix jacchus ENSCJAG00000007437 I
ENSCJAG00000008192 Callithrix jacchus ENSCJAG00000008192 I
HOXD13 Callithrix jacchus ENSCJAG00000008250 I
HOXC13 Callithrix jacchus ENSCJAG00000018800 I
Aan_R001091 Calypte anna Aan_R001091 I
Aan_R004563 Calypte anna Aan_R004563 I
Aan_R012455 Calypte anna Aan_R012455 I
Aan_R014661 Calypte anna Aan_R014661 I
HOXA13 Canis familiaris ENSCAFG00000002970 I
HOXC13 Canis familiaris ENSCAFG00000006648 I
HOXB13 Canis familiaris ENSCAFG00000016870 I
HOXD13 Cavia porcellus ENSCPOG00000006722 I
HOXB13 Cavia porcellus ENSCPOG00000013509 I
HOXC13 Cavia porcellus ENSCPOG00000020390 I
ENSCPOG00000024869 Cavia porcellus ENSCPOG00000024869 I
Cmyd_10010795 Chelonia mydas Cmyd_10010795 I
Cmyd_10015813 Chelonia mydas Cmyd_10015813 I
ENSCSAG00000002517 Chlorocebus sabaeus ENSCSAG00000002517 I
ENSCSAG00000005461 Chlorocebus sabaeus ENSCSAG00000005461 I
ENSCSAG00000014315 Chlorocebus sabaeus ENSCSAG00000014315 I
ENSCSAG00000014475 Chlorocebus sabaeus ENSCSAG00000014475 I
ENSCHOG00000004807 Choloepus hoffmanni ENSCHOG00000004807 I
hox10 Ciona intestinalis ENSCING00000001031 I
ENSCSAVG00000003530 Ciona savignyi ENSCSAVG00000003530 I
hoxa13b Danio rerio ENSDARG00000036254 I
hoxb13a Danio rerio ENSDARG00000056015 I
hoxd13a Danio rerio ENSDARG00000059256 D
hoxc13a Danio rerio ENSDARG00000070353 I
hoxc13b Danio rerio ENSDARG00000090023 I
hoxa13a Danio rerio ENSDARG00000100312 I
HOXB13 Dasypus novemcinctus ENSDNOG00000015177 I
HOXD13 Dasypus novemcinctus ENSDNOG00000019799 I
HOXA13 Dasypus novemcinctus ENSDNOG00000047528 I
ENSDORG00000006328 Dipodomys ordii ENSDORG00000006328 I
Hoxb13 Dipodomys ordii ENSDORG00000008369 I
GF15355 Drosophila ananassae FBgn0092380 I
GG21252 Drosophila erecta FBgn0113432 I
cad Drosophila melanogaster FBgn0000251 D
GL18519 Drosophila persimilis FBgn0156120 I
GA14567 Drosophila pseudoobscura FBgn0074595 I
GM23369 Drosophila sechellia FBgn0178236 I
GD24280 Drosophila simulans FBgn0195628 I
GK14914 Drosophila willistoni FBgn0216919 I
GE12346 Drosophila yakuba FBgn0230096 I
ENSETEG00000006794 Echinops telfairi ENSETEG00000006794 I
HOXB13 Equus caballus ENSECAG00000013619 I
ENSECAG00000014192 Equus caballus ENSECAG00000014192 I
ENSECAG00000020388 Equus caballus ENSECAG00000020388 I
HOXC13 Equus caballus ENSECAG00000024867 I
HOXB13 Erinaceus europaeus ENSEEUG00000004337 I
ENSEEUG00000005384 Erinaceus europaeus ENSEEUG00000005384 I
HOXB13 Felis catus ENSFCAG00000002120 I
ENSFCAG00000027459 Felis catus ENSFCAG00000027459 I
ENSFCAG00000028938 Felis catus ENSFCAG00000028938 I
ENSFCAG00000030694 Felis catus ENSFCAG00000030694 I
ENSFALG00000003118 Ficedula albicollis ENSFALG00000003118 I
ENSFALG00000009407 Ficedula albicollis ENSFALG00000009407 I
ENSFALG00000014896 Ficedula albicollis ENSFALG00000014896 I
ENSGMOG00000005714 Gadus morhua ENSGMOG00000005714 I
ENSGMOG00000013892 Gadus morhua ENSGMOG00000013892 I
ENSGMOG00000015284 Gadus morhua ENSGMOG00000015284 I
ENSGMOG00000017858 Gadus morhua ENSGMOG00000017858 I
ENSGALG00000001543 Gallus gallus ENSGALG00000001543 I
ENSGALG00000009277 Gallus gallus ENSGALG00000009277 I
ENSGALG00000023129 Gallus gallus ENSGALG00000023129 I
HOXA13 Gallus gallus ENSGALG00000027234 I
ENSGALG00000027515 Gallus gallus ENSGALG00000027515 I
cdx1b Gasterosteus aculeatus ENSGACG00000001779 I
hoxb13a Gasterosteus aculeatus ENSGACG00000003421 I
hoxb13a Gasterosteus aculeatus ENSGACG00000005617 I
hoxa13a Gasterosteus aculeatus ENSGACG00000007134 I
hoxa13b Gasterosteus aculeatus ENSGACG00000008296 I
hoxc13a Gasterosteus aculeatus ENSGACG00000009389 I
Gfo_R001376 Geospiza fortis Gfo_R001376 I
Gfo_R015836 Geospiza fortis Gfo_R015836 I
ENSGGOG00000001339 Gorilla gorilla ENSGGOG00000001339 I
HOXB13 Gorilla gorilla ENSGGOG00000001945 I
HOXA13 Gorilla gorilla ENSGGOG00000005309 I
HOXC13 Gorilla gorilla ENSGGOG00000015765 I
ENSGGOG00000023186 Gorilla gorilla ENSGGOG00000023186 I
HOXA13 Homo sapiens ENSG00000106031 D
HOXC13 Homo sapiens ENSG00000123364 D
HOXD13 Homo sapiens ENSG00000128714 D
HOXB13 Homo sapiens ENSG00000159184 D
ENSSTOG00000004117 Ictidomys tridecemlineatus ENSSTOG00000004117 I
ENSSTOG00000014942 Ictidomys tridecemlineatus ENSSTOG00000014942 I
ENSSTOG00000029157 Ictidomys tridecemlineatus ENSSTOG00000029157 I
ENSLACG00000015543 Latimeria chalumnae ENSLACG00000015543 I
ENSLACG00000016784 Latimeria chalumnae ENSLACG00000016784 I
ENSLACG00000017442 Latimeria chalumnae ENSLACG00000017442 I
ENSLOCG00000006295 Lepisosteus oculatus ENSLOCG00000006295 I
ENSLOCG00000007161 Lepisosteus oculatus ENSLOCG00000007161 I
ENSLOCG00000011842 Lepisosteus oculatus ENSLOCG00000011842 I
ENSLOCG00000013457 Lepisosteus oculatus ENSLOCG00000013457 I
ENSLAFG00000000738 Loxodonta africana ENSLAFG00000000738 I
HOXB13 Loxodonta africana ENSLAFG00000011262 I
HOXD13 Loxodonta africana ENSLAFG00000027629 I
HOXC13 Loxodonta africana ENSLAFG00000030195 I
ENSP00000222753 Macaca fascicularis ENSP00000222753 I
ENSP00000290295 Macaca fascicularis ENSP00000290295 I
ENSP00000376322 Macaca fascicularis ENSP00000376322 I
ENSMMUG00000004542 Macaca mulatta ENSMMUG00000004542 I
HOXA13 Macaca mulatta ENSMMUG00000013463 I
ENSMMUG00000020872 Macaca mulatta ENSMMUG00000020872 I
ENSMMUG00000023500 Macaca mulatta ENSMMUG00000023500 I
ENSMEUG00000002348 Macropus eugenii ENSMEUG00000002348 I
ENSMGAG00000015900 Meleagris gallopavo ENSMGAG00000015900 I
ENSMICG00000000502 Microcebus murinus ENSMICG00000000502 I
HOXD13 Microcebus murinus ENSMICG00000002170 I
HOXB13 Microcebus murinus ENSMICG00000007546 I
ML28201a Mnemiopsis leidyi ML28201a I
HOXA13 Monodelphis domestica ENSMODG00000000449 I
HOXD13 Monodelphis domestica ENSMODG00000009550 I
HOXB13 Monodelphis domestica ENSMODG00000012310 I
MDOA015506 Musca domestica MDOA015506 I
ENSMPUG00000004851 Mustela putorius furo ENSMPUG00000004851 I
ENSMPUG00000005890 Mustela putorius furo ENSMPUG00000005890 I
ENSMPUG00000014022 Mustela putorius furo ENSMPUG00000014022 I
ENSMPUG00000015332 Mustela putorius furo ENSMPUG00000015332 I
Hoxc13 Mus musculus ENSMUSG00000001655 D
Hoxd13 Mus musculus ENSMUSG00000001819 D
Hoxa13 Mus musculus ENSMUSG00000038203 D
Hoxb13 Mus musculus ENSMUSG00000049604 D
Myotis_brandtii_HOXB13_10017024 Myotis brandtii Myotis_brandtii_HOXB13_10017024 I
Myotis_brandtii_HOXC13_10022976 Myotis brandtii Myotis_brandtii_HOXC13_10022976 I
Myotis_brandtii_HOXD13_10034995 Myotis brandtii Myotis_brandtii_HOXD13_10034995 I
HOXD13 Myotis lucifugus ENSMLUG00000006997 I
HOXA13 Myotis lucifugus ENSMLUG00000008332 I
HOXC13 Myotis lucifugus ENSMLUG00000015050 I
ENSMLUG00000029480 Myotis lucifugus ENSMLUG00000029480 I
ENSNLEG00000002594 Nomascus leucogenys ENSNLEG00000002594 I
ENSNLEG00000014997 Nomascus leucogenys ENSNLEG00000014997 I
ENSNLEG00000017680 Nomascus leucogenys ENSNLEG00000017680 I
HOXC13 Ochotona princeps ENSOPRG00000006077 I
HOXB13 Ochotona princeps ENSOPRG00000010125 I
ENSOPRG00000010498 Ochotona princeps ENSOPRG00000010498 I
SNAPOd2T00007607001 Oikopleura dioica SNAPOd2T00007607001 I
Ogr02757 Ophisaurus gracilis Ogr02757 I
Ogr12572 Ophisaurus gracilis Ogr12572 I
Ogr14606 Ophisaurus gracilis Ogr14606 I
ENSONIG00000002962 Oreochromis niloticus ENSONIG00000002962 I
ENSONIG00000004601 Oreochromis niloticus ENSONIG00000004601 I
ENSONIG00000006178 Oreochromis niloticus ENSONIG00000006178 I
ENSONIG00000012232 Oreochromis niloticus ENSONIG00000012232 I
ENSOANG00000004742 Ornithorhynchus anatinus ENSOANG00000004742 I
ENSOANG00000007689 Ornithorhynchus anatinus ENSOANG00000007689 I
HOXA13 Ornithorhynchus anatinus ENSOANG00000009173 I
ENSOANG00000015090 Ornithorhynchus anatinus ENSOANG00000015090 I
HOXC13 Oryctolagus cuniculus ENSOCUG00000001156 I
HOXB13 Oryctolagus cuniculus ENSOCUG00000012816 I
ENSOCUG00000024694 Oryctolagus cuniculus ENSOCUG00000024694 I
ENSOCUG00000029547 Oryctolagus cuniculus ENSOCUG00000029547 I
hoxa13a Oryzias latipes ENSORLG00000005043 I
hoxa13b Oryzias latipes ENSORLG00000007597 I
hoxc13a Oryzias latipes ENSORLG00000007896 I
hoxb13a Oryzias latipes ENSORLG00000017031 I
HOXD13 Otolemur garnettii ENSOGAG00000027055 I
HOXA13 Otolemur garnettii ENSOGAG00000028983 I
HOXC13 Otolemur garnettii ENSOGAG00000030391 I
HOXB13 Otolemur garnettii ENSOGAG00000032643 I
ENSOARG00000000107 Ovis aries ENSOARG00000000107 I
ENSOARG00000006844 Ovis aries ENSOARG00000006844 I
ENSOARG00000009550 Ovis aries ENSOARG00000009550 I
ENSOARG00000016363 Ovis aries ENSOARG00000016363 I
HOXC13 Pan troglodytes ENSPTRG00000005025 I
HOXB13 Pan troglodytes ENSPTRG00000009360 I
HOXD13 Pan troglodytes ENSPTRG00000012664 I
HOXA13 Pan troglodytes ENSPTRG00000028643 I
ENSPANG00000002383 Papio anubis ENSPANG00000002383 I
ENSPANG00000012770 Papio anubis ENSPANG00000012770 I
ENSPANG00000020537 Papio anubis ENSPANG00000020537 I
ENSPANG00000022884 Papio anubis ENSPANG00000022884 I
ENSPSIG00000002765 Pelodiscus sinensis ENSPSIG00000002765 I
ENSPSIG00000003141 Pelodiscus sinensis ENSPSIG00000003141 I
ENSPSIG00000006373 Pelodiscus sinensis ENSPSIG00000006373 I
ENSPMAG00000000767 Petromyzon marinus ENSPMAG00000000767 I
ENSPFOG00000002100 Poecilia formosa ENSPFOG00000002100 I
ENSPFOG00000002494 Poecilia formosa ENSPFOG00000002494 I
ENSPFOG00000003827 Poecilia formosa ENSPFOG00000003827 I
ENSPFOG00000003880 Poecilia formosa ENSPFOG00000003880 I
Pvit_02704 Pogona vitticeps Pvit_02704 I
Pvit_07423 Pogona vitticeps Pvit_07423 I
ENSPPYG00000004588 Pongo abelii ENSPPYG00000004588 I
ENSPPYG00000008904 Pongo abelii ENSPPYG00000008904 I
ENSPPYG00000012956 Pongo abelii ENSPPYG00000012956 I
ENSPPYG00000017697 Pongo abelii ENSPPYG00000017697 I
HOXB13 Procavia capensis ENSPCAG00000012722 I
HOXC13 Pteropus vampyrus ENSPVAG00000012296 I
HOXB13 Pteropus vampyrus ENSPVAG00000015531 I
HOXD13 Pteropus vampyrus ENSPVAG00000017415 I
Hoxd13 Rattus norvegicus ENSRNOG00000001588 I
Hoxb13 Rattus norvegicus ENSRNOG00000007491 I
Hoxc13 Rattus norvegicus ENSRNOG00000028679 I
Hoxa13 Rattus norvegicus ENSRNOG00000053148 I
Hoxa13 Rattus norvegicus ENSRNOG00000057061 I
ENSSHAG00000005971 Sarcophilus harrisii ENSSHAG00000005971 I
ENSSHAG00000013189 Sarcophilus harrisii ENSSHAG00000013189 I
ENSSHAG00000015915 Sarcophilus harrisii ENSSHAG00000015915 I
ENSSHAG00000016581 Sarcophilus harrisii ENSSHAG00000016581 I
SMU15038487 Schmidtea mediterranea SMU15038487 I
HOXC13 Sorex araneus ENSSARG00000005621 I
HOXC13 Sus scrofa ENSSSCG00000000279 I
HOXD13 Sus scrofa ENSSSCG00000015979 I
HOXB13 Sus scrofa ENSSSCG00000017541 I
ENSSSCG00000021780 Sus scrofa ENSSSCG00000021780 I
HOXA13 Sus scrofa ENSSSCG00000029666 I
ENSTGUG00000008936 Taeniopygia guttata ENSTGUG00000008936 I
ENSTGUG00000016958 Taeniopygia guttata ENSTGUG00000016958 I
hoxc13a Takifugu rubripes ENSTRUG00000004383 I
hoxb13a Takifugu rubripes ENSTRUG00000005751 I
cdx1b Takifugu rubripes ENSTRUG00000007928 I
hoxb13a Takifugu rubripes ENSTRUG00000009416 I
hoxa13b Takifugu rubripes ENSTRUG00000015364 I
hoxa13a Takifugu rubripes ENSTRUG00000016010 I
ENSTRUG00000018251 Takifugu rubripes ENSTRUG00000018251 I
ENSTSYG00000003737 Tarsius syrichta ENSTSYG00000003737 I
hoxb13a Tetraodon nigroviridis ENSTNIG00000000761 I
hoxc13a Tetraodon nigroviridis ENSTNIG00000001774 I
hoxa13b Tetraodon nigroviridis ENSTNIG00000001781 I
hoxa13a Tetraodon nigroviridis ENSTNIG00000009207 I
AMSG_08218 Thecamonas trahens AMSG_08218 I
HOXB13 Tupaia belangeri ENSTBEG00000002229 I
HOXC13 Tupaia belangeri ENSTBEG00000016269 I
HOXC13 Tursiops truncatus ENSTTRG00000004546 I
HOXB13 Tursiops truncatus ENSTTRG00000007314 I
HOXD13 Tursiops truncatus ENSTTRG00000013771 I
Tal_R009649 Tyto alba Tal_R009649 I
Tal_R009960 Tyto alba Tal_R009960 I
Tal_R011386 Tyto alba Tal_R011386 I
HOXD13 Vicugna pacos ENSVPAG00000010195 I
AAH80434 Xenopus laevis AAH80434 I
hoxa13.L Xenopus laevis XB-GENE-17335312 I
hoxd13.S Xenopus laevis XB-GENE-482324 I
hoxa13.S Xenopus laevis XB-GENE-865329 I
hoxc13 Xenopus tropicalis XB-GENE-478832 I
hoxa13 Xenopus tropicalis XB-GENE-479980 I
hoxd13 Xenopus tropicalis XB-GENE-482320 I
ENSXMAG00000001062 Xiphophorus maculatus ENSXMAG00000001062 I
ENSXMAG00000001641 Xiphophorus maculatus ENSXMAG00000001641 I
ENSXMAG00000013901 Xiphophorus maculatus ENSXMAG00000013901 I