Thhalv10021032m.g (Eutrema salsugineum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Thhalv10021032m.g T174028_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2FD
M06875_2.00 		Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH		 Dap-seq
OMalley et al.(2016)
DEL2_col_a 		0.816 0.816
E2FD
M06876_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL2_colamp_a 		0.816 0.816
E2FD
M10442_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L1_Q2 		0.816 0.816
E2FD
M10443_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L_Q2 		0.816 0.816
E2FE
M01958_2.00 		Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD		 PBM
Weirauch et al.(2014)
pTH8176 		0.691 0.691
E2FE
M06873_2.00 		Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA		 Dap-seq
OMalley et al.(2016)
DEL1_col_a 		0.691 0.691
E2FE
M06874_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL1_colamp_a 		0.691 0.691
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.566 0.566
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.566 0.566
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.566 0.566
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.566 0.566
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.566 0.566
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.566 0.566
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.559 0.559
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.559 0.559
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.559 0.559
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10021032m E2F 20 84
Thhalv10021032m E2F 141 220

Links

Other E2F family TFs
Other Eutrema salsugineum TFs

318 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_011600 Acremonium chrysogenum ACRE_011600 I
AB07914.1 Alternaria brassicicola AB07914.1 I
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I
M437DRAFT_15090 Aureobasidium melanogenum M437DRAFT_15090 I
M438DRAFT_338286 Aureobasidium pullulans M438DRAFT_338286 I
AUEXF2481DRAFT_32739 Aureobasidium subglaciale AUEXF2481DRAFT_32739 I
17752 Aureococcus anophagefferens 17752 N
BBA_01214 Beauveria bassiana BBA_01214 I
COCMIDRAFT_97534 Bipolaris oryzae COCMIDRAFT_97534 I
COCSADRAFT_180514 Bipolaris sorokiniana COCSADRAFT_180514 I
COCSADRAFT_226282 Bipolaris sorokiniana COCSADRAFT_226282 I
COCVIDRAFT_115390 Bipolaris victoriae COCVIDRAFT_115390 I
COCVIDRAFT_17843 Bipolaris victoriae COCVIDRAFT_17843 I
COCCADRAFT_24603 Bipolaris zeicola COCCADRAFT_24603 I
BGHDH14_bgh04339 Blumeria graminis BGHDH14_bgh04339 I
Bcin01g08840 Botrytis cinerea Bcin01g08840 I
A1O1_01197 Capronia coronata A1O1_01197 I
A1O3_08778 Capronia epimyces A1O3_08778 I
PV04_00198 Capronia semiimmersa PV04_00198 I
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I
CLEC003860 Cimex lectularius CLEC003860 I
Z519_04692 Cladophialophora bantiana Z519_04692 I
G647_10093 Cladophialophora carrionii G647_10093 I
PV07_09313 Cladophialophora immunda PV07_09313 I
A1O5_06047 Cladophialophora psammophila A1O5_06047 I
A1O7_01726 Cladophialophora yegresii A1O7_01726 I
CPUR_04901 Claviceps purpurea CPUR_04901 I
fgenesh1_pm.C_scaffold_14000132 Cochliobolus heterostrophus C5 fgenesh1_pm.C_scaffold_14000132 I
CFIO01_13531 Colletotrichum fioriniae CFIO01_13531 I
CGGC5_9539 Colletotrichum gloeosporioides CGGC5_9539 I
GLRG_01394 Colletotrichum graminicola GLRG_01394 I
CH063_04081 Colletotrichum higginsianum CH063_04081 I
CSUB01_00364 Colletotrichum sublineola CSUB01_00364 I
W97_01424 Coniosporium apollinis W97_01424 I
W97_04202 Coniosporium apollinis W97_04202 I
CCM_01555 Cordyceps militaris CCM_01555 I
gw1.4.435.1 Cryphonectria parasitica gw1.4.435.1 I
HMPREF1541_06859 Cyphellophora europaea HMPREF1541_06859 I
DRE_06603 Drechslerella stenobrocha DRE_06603 I
EPUS_09213 Endocarpon pusillum EPUS_09213 I
EV44_g2383 Erysiphe necator EV44_g2383 I
A1O9_00742 Exophiala aquamarina A1O9_00742 I
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I
PV10_01993 Exophiala mesophila PV10_01993 I
PV06_04154 Exophiala oligosperma PV06_04154 I
PV11_09703 Exophiala sideris PV11_09703 I
PV08_04655 Exophiala spinifera PV08_04655 I
PV05_09944 Exophiala xenobiotica PV05_09944 I
Z517_02317 Fonsecaea pedrosoi Z517_02317 I
FFUJ_02729 Fusarium fujikuroi FFUJ_02729 I
FGRRES_07116 Fusarium graminearum FGRRES_07116 I
FOXG_01686 Fusarium oxysporum FOXG_01686 I
FPSE_02664 Fusarium pseudograminearum FPSE_02664 I
GGTG_01518 Gaeumannomyces graminis GGTG_01518 I
M7I_1578 Glarea lozoyensis M7I_1578 I
CMQ_8074 Grosmannia clavigera CMQ_8074 I
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I
LEMA_P064360.1 Leptosphaeria maculans LEMA_P064360.1 I
MPH_08050 Macrophomina phaseolina MPH_08050 I
MGG_01641 Magnaporthe oryzae MGG_01641 I
MAPG_06737 Magnaporthe poae MAPG_06737 I
MBM_02410 Marssonina brunnea MBM_02410 I
MELLADRAFT_85039 Melampsora laricipopulina MELLADRAFT_85039 I
MANI_030028 Metarhizium anisopliae MANI_030028 I
MBR_01483 Metarhizium brunneum MBR_01483 I
MGU_02157 Metarhizium guizhouense MGU_02157 I
MAJ_04030 Metarhizium majus MAJ_04030 I
X797_001988 Metarhizium robertsii X797_001988 I
mgf024995m Mimulus guttatus mgf024995m I
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I
NCU02819 Neurospora crassa NCU02819 D
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I
OCS_01486 Ophiocordyceps sinensis OCS_01486 I
F503_04824 Ophiostoma piceae uamh F503_04824 I
SNOG_03674 Phaeosphaeria nodorum SNOG_03674 I
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I
PODANS_1_7390 Podospora anserina PODANS_1_7390 I
GMDG_05273 Pseudogymnoascus destructans GMDG_05273 I
V499_08602 Pseudogymnoascus pannorum V499_08602 I
PGTG_10028 Puccinia graminis PGTG_10028 I
PGTG_12120 Puccinia graminis PGTG_12120 I
PTT_17082 Pyrenophora teres PTT_17082 I
PTRG_02818 Pyrenophora triticirepentis PTRG_02818 I
Z518_04911 Rhinocladiella mackenziei Z518_04911 I
RO3G_07543 Rhizopus oryzae RO3G_07543 I
RO3G_09728 Rhizopus oryzae RO3G_09728 I
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I
SBOR_0403 Sclerotinia borealis SBOR_0403 I
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I
SETTUDRAFT_157792 Setosphaeria turcica SETTUDRAFT_157792 I
SMAC_00615 Sordaria macrospora SMAC_00615 I
SPBR_04745 Sporothrix brasiliensis SPBR_04745 I
S40288_09735 Stachybotrys chartarum S40288_09735 I
SNOG_03674 Stagonospora nodorum SNOG_03674 I
THITE_2121767 Thielavia terrestris THITE_2121767 I
VHEMI10573 Torrubiella hemipterigena VHEMI10573 I
TRIATDRAFT_321166 Trichoderma atroviride TRIATDRAFT_321166 I
TRIVIDRAFT_228694 Trichoderma virens TRIVIDRAFT_228694 I
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I
PV09_06887 Verruconis gallopava PV09_06887 I
VDBG_04589 Verticillium albo atrum VDBG_04589 I
VDBG_04589 Verticillium alfalfae VDBG_04589 I
VDAG_04140 Verticillium dahliae VDAG_04140 I
VDAG_09161 Verticillium dahliae VDAG_09161 I