HmN_000631100 (Hymenolepis microstoma)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) HmN_000631100 T174933_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.704 0.704
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000631100 EBF1 165 387

Links

Other EBF1 family TFs
Other Hymenolepis microstoma TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G18390 Brachypodium distachyon BRADI4G18390 N 0.000
evm.TU.supercontig_70.116 Carica papaya evm.TU.supercontig_70.116 N 0.000
Cla012038 Citrullus lanatus Cla012038 N 0.000
Ciclev10018153m.g Citrus clementina Ciclev10018153m.g N 0.000
orange1.1g045762m.g Citrus sinensis orange1.1g045762m.g N 0.000
Cucsa.087900 Cucumis sativus Cucsa.087900 N 0.000
Gorai.006G044300 Gossypium raimondii Gorai.006G044300 N 0.000
LPERR11G11520 Leersia perrieri LPERR11G11520 N 0.000
Lus10012554.g Linum usitatissimum Lus10012554.g N 0.000
Lus10041540.g Linum usitatissimum Lus10041540.g N 0.000
cassava38785.m1 Manihot esculenta cassava38785.m1 N 0.000
MTR_7g027190 Medicago truncatula MTR_7g027190 N 0.000
mgf025393m Mimulus guttatus mgf025393m N 0.000
GSMUA_Achr6G20830_001 Musa acuminata GSMUA_Achr6G20830_001 N 0.000
OBART11G14550 Oryza barthii OBART11G14550 N 0.000
ORGLA11G0124900 Oryza glaberrima ORGLA11G0124900 N 0.000
BGIOSGA033939 Oryza indica BGIOSGA033939 N 0.000
OLONG_019881 Oryza longistaminata OLONG_019881 N 0.000
ONIVA11G13990 Oryza nivara ONIVA11G13990 N 0.000
OPUNC11G12230 Oryza punctata OPUNC11G12230 N 0.000
ORUFI11G15600 Oryza rufipogon ORUFI11G15600 N 0.000
Pavir.Ha00645 Panicum virgatum Pavir.Ha00645 N 0.000
Pavir.J25769 Panicum virgatum Pavir.J25769 N 0.000
POPTR_0001s33360 Populus trichocarpa POPTR_0001s33360 N 0.000
30131.m007029 Ricinus communis 30131.m007029 N 0.000
Si027708m.g Setaria italica Si027708m.g N 0.000
Sb05g018070 Sorghum bicolor Sb05g018070 N 0.000
TCM_017269 Theobroma cacao TCM_017269 N 0.000
Traes_2BS_D32231DB0 Triticum aestivum Traes_2BS_D32231DB0 N 0.000
VIT_14s0068g01610 Vitis vinifera VIT_14s0068g01610 N 0.000
GRMZM2G342217 Zea mays GRMZM2G342217 N 0.000