OESDEN_10293 (Oesophagostomum dentatum)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) OESDEN_10293 T174952_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.803 0.803
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.788 0.788
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.788 0.788
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.788 0.788
EBF2
M10466_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_02 		0.788 0.788
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.788 0.788
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.788 0.788
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.788 0.788
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.788 0.788
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OESDEN_10293 EBF1 2 67

Links

Other EBF1 family TFs
Other Oesophagostomum dentatum TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.841
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.754
Alligator_sinensis_CCG017609.1 Alligator sinensis Alligator_sinensis_CCG017609.1 I 0.775
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.750
ANCDUO_04459 Ancylostoma duodenale ANCDUO_04459 N 0.707
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.791
ENSACAG00000010823 Anolis carolinensis ENSACAG00000010823 I 0.855
AALB010330 Anopheles albimanus AALB010330 I 0.729
AATE014419 Anopheles atroparvus AATE014419 I 0.712
ACHR004409 Anopheles christyi ACHR004409 I 0.750
ACOM041529 Anopheles coluzzii ACOM041529 I 0.761
ACUA010350 Anopheles culicifacies ACUA010350 I 0.776
AEPI003553 Anopheles epiroticus AEPI003553 I 0.718
AFAF000230 Anopheles farauti AFAF000230 I 0.788
AFUN004906 Anopheles funestus AFUN004906 I 0.776
ASIS004664 Anopheles sinensis ASIS004664 I 0.797
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.796
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.776
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.823
ACEP22947 Atta cephalotes ACEP22947 I 0.775
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.786
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I 0.712
EBF3 Bos taurus ENSBTAG00000008272 I 0.825
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.812
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.870
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.776
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.743
CJA00446 Caenorhabditis japonica CJA00446 I 0.861
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.727
Aan_R013029 Calypte anna Aan_R013029 I 0.825
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I 0.775
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.818
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.788
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.783
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.769
GH12956 Drosophila grimshawi FBgn0120434 I 0.775
EBF1 Equus caballus ENSECAG00000007964 I 0.750
ENSFCAG00000027202 Felis catus ENSFCAG00000027202 I 0.825
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.963
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.776
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I 0.775
HMEL014948 Heliconius melpomene HMEL014948 I 0.786
HelroG112029 Helobdella robusta HelroG112029 I 0.727
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.938
EBF1 Homo sapiens ENSG00000164330 D 0.825
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.754
ENSSTOG00000007966 Ictidomys tridecemlineatus ENSSTOG00000007966 I 0.825
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.825
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I 0.825
LotgiG225788 Lottia gigantea LotgiG225788 I 0.758
LCUP013862 Lucilia cuprina LCUP013862 I 0.773
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.812
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I 0.825
MCINX016126 Melitaea cinxia MCINX016126 I 0.775
MDOA011385 Musca domestica MDOA011385 I 0.788
ENSMPUG00000013414 Mustela putorius furo ENSMPUG00000013414 I 0.788
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.750
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.754
EBF3 Myotis lucifugus ENSMLUG00000005478 I 0.825
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.788
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I 0.750
OFLC_0000294401 Onchocerca flexuosa OFLC_0000294401 I 0.848
ENSOANG00000004212 Ornithorhynchus anatinus ENSOANG00000004212 I 0.775
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I 0.754
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.750
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.812
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.825
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.788
Pvit_11383 Pogona vitticeps Pvit_11383 I 0.815
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.812
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.750
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.811
Ppa-unc-3 Pristionchus pacificus PPA20518 I 0.821
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.754
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.864
nRc.2.0.1.g14013 Romanomermis culicivorax nRc.2.0.1.g14013 I 0.825
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.806
EBF1 Sus scrofa ENSSSCG00000017046 I 0.754
EBF1 Tetraodon nigroviridis ENSTNIG00000016148 I 0.758
Tal_R004164 Tyto alba Tal_R004164 I 0.776
ebf2.S Xenopus laevis XB-GENE-971141 I 0.788
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.788
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.810