SROB_0000545801 (Schistosoma rodhaini)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) SROB_0000545801 T174969_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000545801-mRNA-1 EBF1 14 84

Links

Other EBF1 family TFs
Other Schistosoma rodhaini TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_008210 Acremonium chrysogenum ACRE_008210 N 0.000
ASIM_0001638701 Anisakis simplex ASIM_0001638701 N 0.000
BOTBODRAFT_174219 Botryobasidium botryosum BOTBODRAFT_174219 N 0.000
BOTBODRAFT_44712 Botryobasidium botryosum BOTBODRAFT_44712 N 0.000
CapteG108943 Capitella teleta CapteG108943 N 0.000
e_gw1.4.238.1 Coccomyxa subellipsoidea C169 e_gw1.4.238.1 N 0.000
GL12242 Drosophila persimilis FBgn0149849 N 0.000
GD20218 Drosophila simulans FBgn0191696 N 0.000
GK21672 Drosophila willistoni FBgn0223657 N 0.000
HCOI00647600 Haemonchus contortus HCOI00647600 N 0.000
Hsal_11763--XP_001120115.1_APIME Harpegnathos saltator Hsal_11763--XP_001120115.1_APIME N 0.000
Genemark.397_g Heterobasidion annosum Genemark.397_g N 0.000
maker-nMf.1.1.scaf01260-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf01260-augustus-gene-0.7 N 0.000
OFLC_0000209301 Onchocerca flexuosa OFLC_0000209301 N 0.000
Solyc04g025930.1 Solanum lycopersicum Solyc04g025930.1 N 0.000
SPER_0000445801 Spirometra erinaceieuropaei SPER_0000445801 N 0.000
SVUK_0000804601 Strongylus vulgaris SVUK_0000804601 N 0.000
TC007519 Tribolium castaneum TC007519 N 0.000