MDP0000565880 (Malus domestica)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 MDP0000565880 T175383_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.826 0.826
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.826 0.826
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.806 0.806
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.725 0.725
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.717 0.717
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.704 0.704
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.700 0.700
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.700 0.700
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000565880 EIN3 37 284

Links

Other EIN3 family TFs
Other Malus domestica TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_17920 Aegilops tauschii F775_17920 I 0.769
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.812
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.726
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.850
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.711
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.707
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.713
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.833
EIL3 Arabidopsis thaliana AT1G73730 D 0.829
EIL1 Arabidopsis thaliana AT2G27050 D 0.704
EIN3 Arabidopsis thaliana AT3G20770 D 0.703
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.703
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.817
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.700
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.751
Bo6g087550 Brassica oleracea Bo6g087550 I 0.820
Bo6g118030 Brassica oleracea Bo6g118030 I 0.829
Bra000528 Brassica rapa Bra000528 I 0.702
Bra003831 Brassica rapa Bra003831 I 0.740
Bra008110 Brassica rapa Bra008110 I 0.819
Bra015970 Brassica rapa Bra015970 I 0.819
PK13351.1 Cannabis sativa PK13351.1 I 0.711
PK19114.1 Cannabis sativa PK19114.1 I 0.931
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.829
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.703
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.706
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.703
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.829
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.706
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.713
Ca_02669 Cicer arietinum Ca_02669 I 0.915
Cla006390 Citrullus lanatus Cla006390 I 0.828
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.707
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.711
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.707
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.923
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.707
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.711
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.923
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.707
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.711
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.927
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.711
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.891
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.711
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.724
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.704
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.833
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.711
gene00392-v1.0-hybrid Fragaria vesca gene00392-v1.0-hybrid I 0.720
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.935
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.711
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.720
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.707
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.915
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.715
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.923
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.711
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.711
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.703
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.870
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.715
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.874
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.795
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.711
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.759
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.709
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.739
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.767
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.891
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.883
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.713
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.911
LjSGA_067101.1 Lotus japonicus LjSGA_067101.1 I 0.714
MDP0000202831 Malus domestica MDP0000202831 I 0.711
MDP0000212881 Malus domestica MDP0000212881 I 0.707
MDP0000306498 Malus domestica MDP0000306498 I 0.707
MDP0000490180 Malus domestica MDP0000490180 I 0.972
MDP0000562585 Malus domestica MDP0000562585 I 1.000
MDP0000564884 Malus domestica MDP0000564884 I 0.707
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.899
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.854
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.720
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.927
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.707
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.700
mgf020935m Mimulus guttatus mgf020935m I 0.866
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.798
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.702
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.769
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.778
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.717
OBART08G19960 Oryza barthii OBART08G19960 I 0.723
OBART09G14750 Oryza barthii OBART09G14750 I 0.810
OB08G26880 Oryza brachyantha OB08G26880 I 0.715
OB09G21280 Oryza brachyantha OB09G21280 I 0.771
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.701
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.810
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.701
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.727
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.810
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.701
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.796
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.701
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.758
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.723
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.796
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.701
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.810
ONIVA08G22530 Oryza nivara ONIVA08G22530 I 0.723
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.701
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.723
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.802
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.701
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I 0.723
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.796
OS03G0324200 Oryza sativa OS03G0324200 I 0.701
OS03G0324300 Oryza sativa OS03G0324300 I 0.701
OS08G0508700 Oryza sativa OS08G0508700 I 0.723
OS09G0490200 Oryza sativa OS09G0490200 D 0.796
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I 0.715
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.728
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.709
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.713
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.755
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.759
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.786
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.735
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.728
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.927
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.771
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.903
Pm028171 Prunus mume Pm028171 I 0.916
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.924
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.707
29708.m000185 Ricinus communis 29708.m000185 I 0.704
30169.m006395 Ricinus communis 30169.m006395 I 0.911
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.903
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.703
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.711
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.931
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.730
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.730
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.810
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.702
Si013426m.g Setaria italica Si013426m.g I 0.733
Si029259m.g Setaria italica Si029259m.g I 0.767
Si034616m.g Setaria italica Si034616m.g I 0.713
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.806
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.707
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.862
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.703
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.720
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.711
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.703
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.720
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.707
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.810
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.703
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.866
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.709
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.747
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.719
TCM_040510 Theobroma cacao TCM_040510 I 0.895
TCM_042022 Theobroma cacao TCM_042022 I 0.720
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.734
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.759
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.763
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.821
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.709
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.711
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.711
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.709
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.899
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.711
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.723
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.743
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.709
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.705