CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf004308m
(
Mimulus guttatus
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
mgf004308m
T181141_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf004308m
FAR1
67
159
EYYSNFARKNGFSIRKARSTESPNLGVYRRDFVCYRSGFNQPRKKVNVEHPRDRKSLRCGCDAKFYLTKEIIDGVTQWYISQFSNVHNHELLE
Links
Other
FAR1
family TFs
Other
Mimulus guttatus
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FRS10
Arabidopsis thaliana
AT5G28530
N
0.865
Bostr.29827s0002
Boechera stricta
Bostr.29827s0002
N
0.876
Bo2g152930
Brassica oleracea
Bo2g152930
N
0.865
Bra020611
Brassica rapa
Bra020611
N
0.854
PK09224.1
Cannabis sativa
PK09224.1
N
0.921
PK07950.1
Cannabis sativa
PK07950.1
N
0.753
Cagra.13833s0001
Capsella grandiflora
Cagra.13833s0001
N
0.865
Carubv10000250m.g
Capsella rubella
Carubv10000250m.g
N
0.865
Ca_07896
Cicer arietinum
Ca_07896
N
0.742
Ciclev10014481m.g
Citrus clementina
Ciclev10014481m.g
N
0.933
Ciclev10014474m.g
Citrus clementina
Ciclev10014474m.g
N
0.753
orange1.1g005579m.g
Citrus sinensis
orange1.1g005579m.g
N
0.933
orange1.1g005549m.g
Citrus sinensis
orange1.1g005549m.g
N
0.753
Cucsa.044640
Cucumis sativus
Cucsa.044640
N
0.764
Eucgr.H00883
Eucalyptus grandis
Eucgr.H00883
N
0.921
Eucgr.D01451
Eucalyptus grandis
Eucgr.D01451
N
0.753
Thhalv10003748m.g
Eutrema salsugineum
Thhalv10003748m.g
N
0.910
gene19817-v1.0-hybrid
Fragaria vesca
gene19817-v1.0-hybrid
N
0.719
gene15606-v1.0-hybrid
Fragaria vesca
gene15606-v1.0-hybrid
N
0.899
GLYMA09G01540
Glycine max
GLYMA09G01540
N
0.753
Gorai.010G189600
Gossypium raimondii
Gorai.010G189600
N
0.764
Gorai.005G129200
Gossypium raimondii
Gorai.005G129200
N
0.944
MDP0000249284
Malus domestica
MDP0000249284
N
0.742
cassava40936.m1
Manihot esculenta
cassava40936.m1
N
0.742
cassava40276.m1
Manihot esculenta
cassava40276.m1
N
0.921
POPTR_0016s00900
Populus trichocarpa
POPTR_0016s00900
N
0.764
FRS10
Populus trichocarpa
POPTR_0014s16500
N
0.899
Pm015052
Prunus mume
Pm015052
N
0.910
PRUPE_ppa002284mg
Prunus persica
PRUPE_ppa002284mg
N
0.910
PRUPE_ppa002276mg
Prunus persica
PRUPE_ppa002276mg
N
0.753
28859.m000324
Ricinus communis
28859.m000324
N
0.955
29758.m000681
Ricinus communis
29758.m000681
N
0.753
SapurV1A.0054s0360
Salix purpurea
SapurV1A.0054s0360
N
0.899
SapurV1A.0089s0660
Salix purpurea
SapurV1A.0089s0660
N
0.764
Solyc07g045520.2
Solanum lycopersicum
Solyc07g045520.2
N
0.921
TCM_030416
Theobroma cacao
TCM_030416
N
0.764
TCM_020251
Theobroma cacao
TCM_020251
N
0.933
FRS10
Vitis vinifera
VIT_12s0057g00960
N
0.933
VIT_00s0194g00200
Vitis vinifera
VIT_00s0194g00200
N
0.775