Carubv10019873m.g (Capsella rubella)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Carubv10019873m.g T181277_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019873m FAR1 100 185

Links

Other FAR1 family TFs
Other Capsella rubella TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000771 Aedes aegypti AAEL000771 N
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N
AALB009772 Anopheles albimanus AALB009772 N
AALB009867 Anopheles albimanus AALB009867 N
AARA000825 Anopheles arabiensis AARA000825 N
AATE015714 Anopheles atroparvus AATE015714 N
AATE016483 Anopheles atroparvus AATE016483 N
ACHR008996 Anopheles christyi ACHR008996 N
ACOM022799 Anopheles coluzzii ACOM022799 N
ACOM026653 Anopheles coluzzii ACOM026653 N
ACUA008827 Anopheles culicifacies ACUA008827 N
ACUA010594 Anopheles culicifacies ACUA010594 N
ACUA012732 Anopheles culicifacies ACUA012732 N
ADIR005631 Anopheles dirus ADIR005631 N
ADIR009661 Anopheles dirus ADIR009661 N
AEPI003629 Anopheles epiroticus AEPI003629 N
AEPI007652 Anopheles epiroticus AEPI007652 N
AEPI007948 Anopheles epiroticus AEPI007948 N
AFUN006689 Anopheles funestus AFUN006689 N
AFUN009317 Anopheles funestus AFUN009317 N
AFUN010198 Anopheles funestus AFUN010198 N
AGAP028091 Anopheles gambiae AGAP028091 N
AMAM004028 Anopheles maculatus AMAM004028 N
AMAM023617 Anopheles maculatus AMAM023617 N
AMEC000538 Anopheles melas AMEC000538 I
AMEC007393 Anopheles melas AMEC007393 N
AMEC011653 Anopheles melas AMEC011653 N
AMEM002834 Anopheles merus AMEM002834 N
AMEM007694 Anopheles merus AMEM007694 N
AMIN001220 Anopheles minimus AMIN001220 N
AMIN009302 Anopheles minimus AMIN009302 N
AQUA001261 Anopheles quadriannulatus AQUA001261 N
AQUA005880 Anopheles quadriannulatus AQUA005880 N
ASIS001889 Anopheles sinensis ASIS001889 N
ASTEI06131 Anopheles stephensi ASTEI06131 N
ASTEI06408 Anopheles stephensi ASTEI06408 N
GB40963 Apis mellifera GB40963 N
Afo_R011382 Aptenodytes forsteri Afo_R011382 N
Afo_R012388 Aptenodytes forsteri Afo_R012388 N
Afo_R012670 Aptenodytes forsteri Afo_R012670 N
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N
ENSAMXG00000003325 Astyanax mexicanus ENSAMXG00000003325 N
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I
ACEP10857 Atta cephalotes ACEP10857 N
ACEP25851 Atta cephalotes ACEP25851 N
67303 Aureococcus anophagefferens 67303 N
BGLB010902 Biomphalaria glabrata BGLB010902 N
BGIBMGA003081 Bombyx mori BGIBMGA003081 N
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I
yakG000714 Bos grunniens yakG000714 N
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N
Brh_R004116 Buceros rhinoceros Brh_R004116 N
Brh_R007868 Buceros rhinoceros Brh_R007868 N
CBN19486 Caenorhabditis brenneri CBN19486 N
CBN25334 Caenorhabditis brenneri CBN25334 N
sox-2 Caenorhabditis elegans WBGene00004949 I
SOX8 Callithrix jacchus ENSCJAG00000002684 I
SOX18 Callithrix jacchus ENSCJAG00000022379 N
Aan_R006397 Calypte anna Aan_R006397 N
PK00252.1 Cannabis sativa PK00252.1 N
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N
Cmyd_10009600 Chelonia mydas Cmyd_10009600 N
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N
CLEC006960 Cimex lectularius CLEC006960 N
Cla016375 Citrullus lanatus Cla016375 N
CNM02020 Cryptococcus neoformans CNM02020 N
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N
CPIJ012041 Culex quinquefasciatus CPIJ012041 N
CPIJ012498 Culex quinquefasciatus CPIJ012498 N
CPIJ014017 Culex quinquefasciatus CPIJ014017 N
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N
YQE_03817 Dendroctonus ponderosae YQE_03817 N
YQE_08562 Dendroctonus ponderosae YQE_08562 N
YQE_13041 Dendroctonus ponderosae YQE_13041 N
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N
Sox6 Dipodomys ordii ENSDORG00000013073 N
SOX18 Echinops telfairi ENSETEG00000001816 N
SOX10 Echinops telfairi ENSETEG00000012633 I
SOX8 Echinops telfairi ENSETEG00000015470 N
SOX9 Echinops telfairi ENSETEG00000020237 I
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N
EDI_065970 Entamoeba dispar EDI_065970 N
SOX8 Equus caballus ENSECAG00000016320 I
UCREL1_237 Eutypa lata UCREL1_237 N
UCREL1_749 Eutypa lata UCREL1_749 N
SOX8 Felis catus ENSFCAG00000004219 N
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I
SOX2 Felis catus ENSFCAG00000029205 I
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N
NechaG79025 Fusarium solani NechaG79025 N
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N
Gfo_R008143 Geospiza fortis Gfo_R008143 N
M7I_1506 Glarea lozoyensis M7I_1506 N
GPLIN_000970900 Globodera pallida GPLIN_000970900 N
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N
GLYMA20G01570 Glycine max GLYMA20G01570 N
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N
HHAL000218-PA Halyomorpha halys HHAL000218-PA N
HHAL001293-PA Halyomorpha halys HHAL001293-PA N
HHAL001583-PA Halyomorpha halys HHAL001583-PA N
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N
HMEL013676 Heliconius melpomene HMEL013676 N
HelroG68905 Helobdella robusta HelroG68905 N
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N
HmN_000301900 Hymenolepis microstoma HmN_000301900 N
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I
ISCW001638 Ixodes scapularis ISCW001638 N
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I
LDEC017494 Leptinotarsa decemlineata LDEC017494 N
LDEC018263 Leptinotarsa decemlineata LDEC018263 N
LDEC019307 Leptinotarsa decemlineata LDEC019307 N
LotgiG143673 Lottia gigantea LotgiG143673 N
LCUP001586 Lucilia cuprina LCUP001586 N
ENSP00000409273 Macaca fascicularis ENSP00000409273 I
MESCA006364 Megaselia scalaris MESCA006364 N
MESCA012239 Megaselia scalaris MESCA012239 I
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N
Minc18937 Meloidogyne incognita Minc18937 N
SOX8 Microcebus murinus ENSMICG00000011516 I
MPER_06248 Moniliophthora perniciosa MPER_06248 N
Hmg20b Mus musculus ENSMUSG00000020232 D
Sox17 Mus musculus ENSMUSG00000025902 D
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N
SOX9 Myotis lucifugus ENSMLUG00000030312 I
fgenesh1_pg.sca_3_chr4_2_0000426 Nectria haematococca fgenesh1_pg.sca_3_chr4_2_0000426 N
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N
SOX9 Ochotona princeps ENSOPRG00000007860 N
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N
Ogr00751 Ophisaurus gracilis Ogr00751 I
Ogr08337 Ophisaurus gracilis Ogr08337 N
Ogr11176 Ophisaurus gracilis Ogr11176 N
Ogr13852 Ophisaurus gracilis Ogr13852 N
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I
SOX18 Pan troglodytes ENSPTRG00000030459 I
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N
PHUM433280 Pediculus humanus PHUM433280 N
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N
PPAI003639 Phlebotomus papatasi PPAI003639 N
PPAI005428 Phlebotomus papatasi PPAI005428 N
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N
F443_09320 Phytophthora parasitica F443_09320 N
Phyra76615 Phytophthora ramorum Phyra76615 N
Physo127875 Phytophthora sojae Physo127875 N
JL09_g5343 Pichia kudriavzevii JL09_g5343 N
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N
EFA85451.1 Polysphondylium pallidum EFA85451.1 N
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N
PPA11045 Pristionchus pacificus PPA11045 N
SOX2 Procavia capensis ENSPCAG00000003690 I
ENSPCAG00000014137 Procavia capensis ENSPCAG00000014137 N
SOX18 Procavia capensis ENSPCAG00000015663 N
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N
RPRC001038 Rhodnius prolixus RPRC001038 N
SapurV1A.0237s0190 Salix purpurea SapurV1A.0237s0190 N
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N
SMU15030186 Schmidtea mediterranea SMU15030186 N
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N
SINV16572 Solenopsis invicta SINV16572 N
SINV19749 Solenopsis invicta SINV19749 N
SINV24165 Solenopsis invicta SINV24165 N
BBX Sorex araneus ENSSARG00000008353 N
SOX17 Sorex araneus ENSSARG00000009573 I
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N
L898_g4879 Steinernema monticolum L898_g4879 N
SMAR007058 Strigamia maritima SMAR007058 N
SMAR010125 Strigamia maritima SMAR010125 N
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N
TCNE_0000669501 Toxocara canis TCNE_0000669501 N
TC009856 Tribolium castaneum TC009856 N
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N
TVAG_114290 Trichomonas vaginalis TVAG_114290 N
TVAG_390840 Trichomonas vaginalis TVAG_390840 N
D918_08317 Trichuris suis D918_08317 N
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N
SOX9 Tupaia belangeri ENSTBEG00000000175 N
LEF1 Tursiops truncatus ENSTTRG00000008109 N
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I
VDBG_04936 Verticillium albo atrum VDBG_04936 N
VDBG_04936 Verticillium alfalfae VDBG_04936 N
TCF7L2 Vicugna pacos ENSVPAG00000008158 N
ENSVPAG00000008729 Vicugna pacos ENSVPAG00000008729 N
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N
WUBG_12101 Wuchereria bancrofti WUBG_12101 N
L798_00185 Zootermopsis nevadensis L798_00185 N
L798_05432 Zootermopsis nevadensis L798_05432 N
L798_12046 Zootermopsis nevadensis L798_12046 N