Pavir.Da01536 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Da01536 T181701_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da01536.1.p FAR1 31 77

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02130 Aegilops tauschii F775_02130 N
BRADI3G38360 Brachypodium distachyon BRADI3G38360 N
Eucgr.F02138 Eucalyptus grandis Eucgr.F02138 N
MLOC_2366 Hordeum vulgare MLOC_2366 N
MLOC_70640 Hordeum vulgare MLOC_70640 N
LPERR01G07000 Leersia perrieri LPERR01G07000 I
LPERR08G15030 Leersia perrieri LPERR08G15030 N
mgf022146m Mimulus guttatus mgf022146m N
GSMUA_Achr3G06780_001 Musa acuminata GSMUA_Achr3G06780_001 N
GSMUA_Achr9G15140_001 Musa acuminata GSMUA_Achr9G15140_001 N
OBART09G13210 Oryza barthii OBART09G13210 N
OB08G25230 Oryza brachyantha OB08G25230 N
ORGLA08G0157100 Oryza glaberrima ORGLA08G0157100 N
OGLUM08G19000 Oryza glumaepatula OGLUM08G19000 N
BGIOSGA030928 Oryza indica BGIOSGA030928 N
BGIOSGA028855 Oryza indica BGIOSGA028855 N
OMERI06G24090 Oryza meridionalis OMERI06G24090 I
OMERI09G10230 Oryza meridionalis OMERI09G10230 N
ONIVA08G20180 Oryza nivara ONIVA08G20180 N
ONIVA09G13640 Oryza nivara ONIVA09G13640 N
OPUNC08G16020 Oryza punctata OPUNC08G16020 N
OPUNC09G11520 Oryza punctata OPUNC09G11520 I
ORUFI08G20260 Oryza rufipogon ORUFI08G20260 N
ORUFI09G14130 Oryza rufipogon ORUFI09G14130 N
OS08G0477900 Oryza sativa OS08G0477900 N
Pavir.J25149 Panicum virgatum Pavir.J25149 N
Pavir.J16121 Panicum virgatum Pavir.J16121 N
Pavir.Fa00651 Panicum virgatum Pavir.Fa00651 N
Pavir.Ba01985 Panicum virgatum Pavir.Ba01985 N
29908.m006255 Ricinus communis 29908.m006255 N
Si014356m.g Setaria italica Si014356m.g N
Si033077m.g Setaria italica Si033077m.g N
Solyc02g076920.2 Solanum lycopersicum Solyc02g076920.2 I
PGSC0003DMG400010208 Solanum tuberosum PGSC0003DMG400010208 I
Sb07g023280 Sorghum bicolor Sb07g023280 N
Sb02g026920 Sorghum bicolor Sb02g026920 N
Traes_2AL_7A37B5232 Triticum aestivum Traes_2AL_7A37B5232 N
Traes_2BL_649181D92 Triticum aestivum Traes_2BL_649181D92 N
Traes_2DL_5F0BD9D6F Triticum aestivum Traes_2DL_5F0BD9D6F N
Traes_5BL_553BE31FE Triticum aestivum Traes_5BL_553BE31FE N
TRIUR3_09991 Triticum urartu TRIUR3_09991 N
GRMZM2G082630 Zea mays GRMZM2G082630 N
GRMZM2G113257 Zea mays GRMZM2G113257 N
GRMZM2G145146 Zea mays GRMZM2G145146 N