CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_09975
(
Verticillium albo atrum
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
VDBG_09975
T184418_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08634
M01993_2.00
Neurospora crassa
NNRCAAACAN
NTGTTTGYNN
PBM
Weirauch et al.(2014)
pTH9730
0.811
0.581
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_09975T0
Forkhead
258
365
KNGEPYARLIYRAFMSVPSHAMTLQEIYEWFRVNTDKANSPGKDGWKNSIRHNLSMNHAFVRREKIQDTELGAGGPLPIPQPAGDARKSTEWVLEDWALRDGVQSTTR
Links
Other
Forkhead
family TFs
Other
Verticillium albo atrum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EDP45324.1
Malassezia globosa
EDP45324.1
N
MSY001_2707
Malassezia sympodialis
MSY001_2707
N
fgeneshMC_pg.8_#_88
Mucor circinelloides
fgeneshMC_pg.8_#_88
N
fgeneshMC_pg.4_#_663
Mucor circinelloides
fgeneshMC_pg.4_#_663
N
fgeneshMC_pg.3_#_885
Mucor circinelloides
fgeneshMC_pg.3_#_885
I
fgeneshMC_pg.1_#_1575
Mucor circinelloides
fgeneshMC_pg.1_#_1575
N
estExt_fgeneshMC_pg.C_30057
Mucor circinelloides
estExt_fgeneshMC_pg.C_30057
N
gw1.8.425.1
Phycomyces blakesleeanus
gw1.8.425.1
N
fgeneshPB_pg.3__11
Phycomyces blakesleeanus
fgeneshPB_pg.3__11
N
fgeneshPB_pg.2__345
Phycomyces blakesleeanus
fgeneshPB_pg.2__345
N
estExt_fgeneshPB_pg.C_50592
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_50592
N
estExt_fgeneshPB_pg.C_440039
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_440039
N
PSEUBRA_SCAF2g02695
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02695
N
PHSY_003887
Pseudozyma hubeiensis
PHSY_003887
N
GLOINDRAFT_44505
Rhizophagus irregularis
GLOINDRAFT_44505
N
RO3G_04904
Rhizopus oryzae
RO3G_04904
N
RO3G_16953
Rhizopus oryzae
RO3G_16953
N
RO3G_14274
Rhizopus oryzae
RO3G_14274
N
RO3G_06899
Rhizopus oryzae
RO3G_06899
N
RO3G_06395
Rhizopus oryzae
RO3G_06395
I
RO3G_05037
Rhizopus oryzae
RO3G_05037
N
RO3G_02446
Rhizopus oryzae
RO3G_02446
N
sr12730
Sporisorium reilianum
sr12730
N
K437DRAFT_222727
Tilletiaria anomala
K437DRAFT_222727
N
UREG_00857
Uncinocarpus reesii
UREG_00857
I
UHOR_02465
Ustilago hordei
UHOR_02465
I