genemark-nMf.1.1.scaf00384-processed-gene-0.3 (Meloidogyne floridensis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 genemark-nMf.1.1.scaf00384-processed-gene-0.3 T190545_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Foxp2
M00792_2.00 		Mus musculus
RTAAACAD
HTGTTTAY		 PBM
Weirauch et al.(2013)
pTH1288 		0.774 0.793
FOXP2
M05866_2.00 		Homo sapiens
RTAAAYAWNN
NNWTRTTTAY		 SMiLE-seq
Isakova et al.(2017)
FOXP2 		0.774 0.793
FOXP2
M08116_2.00 		Homo sapiens
NDGTAAACAVN
NBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0593.1 		0.774 0.793
FOXP2
M09089_2.00 		Homo sapiens
DGTAAACAV
BTGTTTACH		 Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C 		0.774 0.793
Foxp2
M09101_2.00 		Mus musculus
NGTAAACAN
NTGTTTACN		 Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A 		0.774 0.793
FOXP1
M00836_2.00 		Homo sapiens
NRTMAACANN
NNTGTTKAYN		 PBM
Gabut et al.(2011)
pEX0123 		0.756 0.793
FOXP1
M00837_2.00 		Homo sapiens
DGTAAACAA
TTGTTTACH		 PBM
Gabut et al.(2011)
pEX0124 		0.756 0.793
FOXP1
M01976_2.00 		Homo sapiens
RTAAACAA
TTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5656 		0.756 0.793
Foxp1
M00793_2.00 		Mus musculus
NRTMAAYAN
NTRTTKAYN		 PBM
Weirauch et al.(2013)
pTH3855 		0.756 0.793
FOXP1
M04811_2.00 		Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX 		0.756 0.793
FOXP1
M08115_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0481.2 		0.756 0.793
FOXP1
M09086_2.00 		Homo sapiens
RKAAACAVM
KBTGTTTMY		 Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A 		0.756 0.793
FOXP1
M09541_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006 		0.756 0.793
FOXP1
M10536_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXP1_01 		0.756 0.793
FOXP1
M04812_2.00 		Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX 		0.756 0.793
FoxP
M03753_2.00 		Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT		 SELEX
Nitta et al.(2015)
CG16899_1 		0.738 0.732
FoxP
M06201_2.00 		Drosophila melanogaster
VRTAAACAA
TTGTTTAYB		 B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735 		0.738 0.732
FoxP
M06202_2.00 		Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB		 B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905 		0.738 0.732
FoxP
M06203_2.00 		Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN		 B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905 		0.738 0.732
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf00384-processed-gene-0.3-mRNA-1 Forkhead 599 684

Links

Other Forkhead family TFs
Other Meloidogyne floridensis TFs

353 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02773 Aegilops tauschii F775_02773 I 0.000
F775_06136 Aegilops tauschii F775_06136 I 0.000
F775_11235 Aegilops tauschii F775_11235 I 0.000
F775_14942 Aegilops tauschii F775_14942 I 0.000
AMTR_s00003p00271440 Amborella trichopoda AMTR_s00003p00271440 I 0.000
AMTR_s00038p00183620 Amborella trichopoda AMTR_s00038p00183620 I 0.000
Aquca_013_00356 Aquilegia coerulea Aquca_013_00356 I 0.000
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.000
AtMYB17 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002102 I 0.000
MYB92 Arabidopsis lyrata fgenesh2_kg.6__990__AT5G10280.1 I 0.000
AtMYB17 Arabidopsis thaliana AT3G61250 D 0.000
MYB92 Arabidopsis thaliana AT5G10280 D 0.000
Bostr.13158s0117 Boechera stricta Bostr.13158s0117 I 0.000
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.000
Bostr.13175s0070 Boechera stricta Bostr.13175s0070 I 0.000
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.000
BRADI1G51747 Brachypodium distachyon BRADI1G51747 I 0.000
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.000
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.000
Bo6g077600 Brassica oleracea Bo6g077600 I 0.000
Bo8g095790 Brassica oleracea Bo8g095790 I 0.000
Bra000453 Brassica rapa Bra000453 I 0.000
Bra003443 Brassica rapa Bra003443 I 0.000
Bra007588 Brassica rapa Bra007588 I 0.000
Bra014446 Brassica rapa Bra014446 I 0.000
PK05754.1 Cannabis sativa PK05754.1 I 0.000
PK18231.1 Cannabis sativa PK18231.1 I 0.000
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.000
Cagra.3373s0030 Capsella grandiflora Cagra.3373s0030 I 0.000
Carubv10018382m.g Capsella rubella Carubv10018382m.g I 0.000
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.000
evm.TU.supercontig_18.232 Carica papaya evm.TU.supercontig_18.232 I 0.000
evm.TU.supercontig_36.134 Carica papaya evm.TU.supercontig_36.134 I 0.000
evm.TU.supercontig_90.68 Carica papaya evm.TU.supercontig_90.68 I 0.000
Ca_06226 Cicer arietinum Ca_06226 I 0.000
Ca_11228 Cicer arietinum Ca_11228 I 0.000
Ca_11832 Cicer arietinum Ca_11832 I 0.000
Ca_13779 Cicer arietinum Ca_13779 I 0.000
Cla013211 Citrullus lanatus Cla013211 I 0.000
Cla021563 Citrullus lanatus Cla021563 I 0.000
Ciclev10003958m.g Citrus clementina Ciclev10003958m.g I 0.000
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.000
Ciclev10020765m.g Citrus clementina Ciclev10020765m.g I 0.000
Ciclev10021268m.g Citrus clementina Ciclev10021268m.g I 0.000
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.000
Ciclev10026023m.g Citrus clementina Ciclev10026023m.g I 0.000
orange1.1g021486m.g Citrus sinensis orange1.1g021486m.g I 0.000
orange1.1g037998m.g Citrus sinensis orange1.1g037998m.g I 0.000
orange1.1g039198m.g Citrus sinensis orange1.1g039198m.g I 0.000
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.000
orange1.1g045434m.g Citrus sinensis orange1.1g045434m.g I 0.000
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.000
Cucsa.258270 Cucumis sativus Cucsa.258270 I 0.000
Cucsa.318610 Cucumis sativus Cucsa.318610 I 0.000
Eucgr.D02271 Eucalyptus grandis Eucgr.D02271 I 0.000
Eucgr.E00175 Eucalyptus grandis Eucgr.E00175 I 0.000
Eucgr.I00442 Eucalyptus grandis Eucgr.I00442 I 0.000
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.000
Thhalv10006126m.g Eutrema salsugineum Thhalv10006126m.g I 0.000
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.000
gene12564-v1.0-hybrid Fragaria vesca gene12564-v1.0-hybrid I 0.000
gene16287-v1.0-hybrid Fragaria vesca gene16287-v1.0-hybrid I 0.000
gene19065-v1.0-hybrid Fragaria vesca gene19065-v1.0-hybrid I 0.000
GLYMA01G44370 Glycine max GLYMA01G44370 I 0.000
GLYMA02G13770 Glycine max GLYMA02G13770 I 0.000
GLYMA03G01540 Glycine max GLYMA03G01540 I 0.000
GLYMA06G10840 Glycine max GLYMA06G10840 I 0.000
GLYMA09G39721 Glycine max GLYMA09G39721 I 0.000
GLYMA11G01150 Glycine max GLYMA11G01150 I 0.000
GLYMA11G11570 Glycine max GLYMA11G11570 I 0.000
GLYMA12G01960 Glycine max GLYMA12G01960 I 0.000
GLYMA18G46480 Glycine max GLYMA18G46480 I 0.000
Gorai.001G169700 Gossypium raimondii Gorai.001G169700 I 0.000
Gorai.003G183700 Gossypium raimondii Gorai.003G183700 I 0.000
Gorai.004G157600 Gossypium raimondii Gorai.004G157600 I 0.000
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.000
Gorai.007G236800 Gossypium raimondii Gorai.007G236800 I 0.000
Gorai.007G348600 Gossypium raimondii Gorai.007G348600 I 0.000
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.000
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.000
LPERR04G19330 Leersia perrieri LPERR04G19330 I 0.000
LPERR06G07150 Leersia perrieri LPERR06G07150 I 0.000
Lus10014784.g Linum usitatissimum Lus10014784.g I 0.000
Lus10027459.g Linum usitatissimum Lus10027459.g I 0.000
Lus10030378.g Linum usitatissimum Lus10030378.g I 0.000
Lus10036472.g Linum usitatissimum Lus10036472.g I 0.000
Lus10039214.g Linum usitatissimum Lus10039214.g I 0.000
Lus10041142.g Linum usitatissimum Lus10041142.g I 0.000
chr1.CM0591.530.nd Lotus japonicus chr1.CM0591.530.nd I 0.000
chr2.CM0124.80.nc Lotus japonicus chr2.CM0124.80.nc I 0.000
chr3.CM0127.290.nc Lotus japonicus chr3.CM0127.290.nc I 0.000
MDP0000119725 Malus domestica MDP0000119725 I 0.000
MDP0000228252 Malus domestica MDP0000228252 I 0.000
MDP0000302984 Malus domestica MDP0000302984 I 0.000
MDP0000320772 Malus domestica MDP0000320772 I 0.000
MDP0000607330 Malus domestica MDP0000607330 I 0.000
cassava25066.valid.m1 Manihot esculenta cassava25066.valid.m1 I 0.000
cassava26282.m1 Manihot esculenta cassava26282.m1 I 0.000
cassava34465.m1 Manihot esculenta cassava34465.m1 I 0.000
cassava39451.m1 Manihot esculenta cassava39451.m1 I 0.000
cassava40203.m1 Manihot esculenta cassava40203.m1 I 0.000
cassava44382.m1 Manihot esculenta cassava44382.m1 I 0.000
MTR_1g100653 Medicago truncatula MTR_1g100653 I 0.000
MTR_4g478180 Medicago truncatula MTR_4g478180 I 0.000
MTR_5g007370 Medicago truncatula MTR_5g007370 I 0.000
MTR_7g076740 Medicago truncatula MTR_7g076740 I 0.000
MTR_8g031360 Medicago truncatula MTR_8g031360 I 0.000
mgf012840m Mimulus guttatus mgf012840m I 0.000
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.000
GSMUA_Achr10G24560_001 Musa acuminata GSMUA_Achr10G24560_001 I 0.000
GSMUA_Achr11G04090_001 Musa acuminata GSMUA_Achr11G04090_001 I 0.000
GSMUA_Achr5G12230_001 Musa acuminata GSMUA_Achr5G12230_001 I 0.000
GSMUA_Achr5G23240_001 Musa acuminata GSMUA_Achr5G23240_001 I 0.000
GSMUA_Achr6G02550_001 Musa acuminata GSMUA_Achr6G02550_001 I 0.000
GSMUA_Achr6G04130_001 Musa acuminata GSMUA_Achr6G04130_001 I 0.000
GSMUA_Achr7G18410_001 Musa acuminata GSMUA_Achr7G18410_001 I 0.000
GSMUA_Achr9G14850_001 Musa acuminata GSMUA_Achr9G14850_001 I 0.000
GSMUA_AchrUn_randomG15560_001 Musa acuminata GSMUA_AchrUn_randomG15560_001 I 0.000
OBART02G32900 Oryza barthii OBART02G32900 I 0.000
OBART04G23600 Oryza barthii OBART04G23600 I 0.000
OBART06G00820 Oryza barthii OBART06G00820 I 0.000
OBART06G07710 Oryza barthii OBART06G07710 I 0.000
OB02G32960 Oryza brachyantha OB02G32960 I 0.000
OB02G39890 Oryza brachyantha OB02G39890 I 0.000
OB04G30520 Oryza brachyantha OB04G30520 I 0.000
OB06G17320 Oryza brachyantha OB06G17320 I 0.000
OB08G25790 Oryza brachyantha OB08G25790 I 0.000
ORGLA02G0284500 Oryza glaberrima ORGLA02G0284500 I 0.000
ORGLA04G0201500 Oryza glaberrima ORGLA04G0201500 I 0.000
ORGLA06G0073000 Oryza glaberrima ORGLA06G0073000 I 0.000
ORGLA08G0162300 Oryza glaberrima ORGLA08G0162300 I 0.000
OGLUM02G33500 Oryza glumaepatula OGLUM02G33500 I 0.000
OGLUM04G23540 Oryza glumaepatula OGLUM04G23540 I 0.000
OGLUM06G00580 Oryza glumaepatula OGLUM06G00580 I 0.000
OGLUM06G08200 Oryza glumaepatula OGLUM06G08200 I 0.000
OGLUM08G19650 Oryza glumaepatula OGLUM08G19650 I 0.000
BGIOSGA008700 Oryza indica BGIOSGA008700 I 0.000
BGIOSGA014443 Oryza indica BGIOSGA014443 I 0.000
BGIOSGA022168 Oryza indica BGIOSGA022168 I 0.000
BGIOSGA022169 Oryza indica BGIOSGA022169 I 0.000
BGIOSGA022174 Oryza indica BGIOSGA022174 I 0.000
OMERI02G31500 Oryza meridionalis OMERI02G31500 I 0.000
OMERI06G00710 Oryza meridionalis OMERI06G00710 I 0.000
OMERI06G09300 Oryza meridionalis OMERI06G09300 I 0.000
OMERI08G14710 Oryza meridionalis OMERI08G14710 I 0.000
ONIVA02G35050 Oryza nivara ONIVA02G35050 I 0.000
ONIVA04G19830 Oryza nivara ONIVA04G19830 I 0.000
ONIVA06G00830 Oryza nivara ONIVA06G00830 I 0.000
ONIVA06G08940 Oryza nivara ONIVA06G08940 I 0.000
ONIVA08G20680 Oryza nivara ONIVA08G20680 I 0.000
OPUNC02G30360 Oryza punctata OPUNC02G30360 I 0.000
OPUNC03G18740 Oryza punctata OPUNC03G18740 I 0.000
OPUNC04G21140 Oryza punctata OPUNC04G21140 I 0.000
OPUNC06G00590 Oryza punctata OPUNC06G00590 I 0.000
ORUFI02G27000 Oryza rufipogon ORUFI02G27000 I 0.000
ORUFI02G34560 Oryza rufipogon ORUFI02G34560 I 0.000
ORUFI04G25320 Oryza rufipogon ORUFI04G25320 I 0.000
ORUFI06G00810 Oryza rufipogon ORUFI06G00810 I 0.000
ORUFI06G07920 Oryza rufipogon ORUFI06G07920 I 0.000
ORUFI08G20890 Oryza rufipogon ORUFI08G20890 I 0.000
OS02G0641900 Oryza sativa OS02G0641900 I 0.000
OS04G0593200 Oryza sativa OS04G0593200 I 0.000
OS06G0112700 Oryza sativa OS06G0112700 I 0.000
OS06G0221000 Oryza sativa OS06G0221000 I 0.000
Pavir.Aa01232 Panicum virgatum Pavir.Aa01232 I 0.000
Pavir.Ab02419 Panicum virgatum Pavir.Ab02419 I 0.000
Pavir.Da01312 Panicum virgatum Pavir.Da01312 I 0.000
Pavir.Da02398 Panicum virgatum Pavir.Da02398 I 0.000
Pavir.Db01850 Panicum virgatum Pavir.Db01850 I 0.000
Pavir.Fb01820 Panicum virgatum Pavir.Fb01820 I 0.000
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.000
Pavir.J23197 Panicum virgatum Pavir.J23197 I 0.000
e_gw1.317.17.1 Physcomitrella patens e_gw1.317.17.1 I 0.000
e_gw1.45.189.1 Physcomitrella patens e_gw1.45.189.1 I 0.000
POPTR_0002s09720 Populus trichocarpa POPTR_0002s09720 I 0.000
POPTR_0005s07590 Populus trichocarpa POPTR_0005s07590 I 0.000
POPTR_0005s17080 Populus trichocarpa POPTR_0005s17080 I 0.000
AtMYB17 Populus trichocarpa POPTR_0014s07700 I 0.000
POPTR_0015s13180 Populus trichocarpa POPTR_0015s13180 I 0.000
Pm002011 Prunus mume Pm002011 I 0.000
Pm018056 Prunus mume Pm018056 I 0.000
Pm025102 Prunus mume Pm025102 I 0.000
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.000
PRUPE_ppa007268mg Prunus persica PRUPE_ppa007268mg I 0.000
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.000
PRUPE_ppa019923mg Prunus persica PRUPE_ppa019923mg I 0.000
30174.m009001 Ricinus communis 30174.m009001 I 0.000
SapurV1A.0024s0060 Salix purpurea SapurV1A.0024s0060 I 0.000
SapurV1A.0403s0220 Salix purpurea SapurV1A.0403s0220 I 0.000
SapurV1A.0533s0230 Salix purpurea SapurV1A.0533s0230 I 0.000
SapurV1A.0966s0040 Salix purpurea SapurV1A.0966s0040 I 0.000
SapurV1A.1009s0010 Salix purpurea SapurV1A.1009s0010 I 0.000
SapurV1A.2488s0010 Salix purpurea SapurV1A.2488s0010 I 0.000
Si006790m.g Setaria italica Si006790m.g I 0.000
Si008086m.g Setaria italica Si008086m.g I 0.000
Si017785m.g Setaria italica Si017785m.g I 0.000
Si017934m.g Setaria italica Si017934m.g I 0.000
Si039538m.g Setaria italica Si039538m.g I 0.000
Solyc01g094360.2 Solanum lycopersicum Solyc01g094360.2 I 0.000
Solyc04g056310.2 Solanum lycopersicum Solyc04g056310.2 I 0.000
Solyc04g074170.1 Solanum lycopersicum Solyc04g074170.1 I 0.000
Solyc05g048830.2 Solanum lycopersicum Solyc05g048830.2 I 0.000
PGSC0003DMG400000027 Solanum tuberosum PGSC0003DMG400000027 I 0.000
PGSC0003DMG400006408 Solanum tuberosum PGSC0003DMG400006408 I 0.000
PGSC0003DMG400021654 Solanum tuberosum PGSC0003DMG400021654 I 0.000
Sb04g033670 Sorghum bicolor Sb04g033670 I 0.000
TCM_001102 Theobroma cacao TCM_001102 I 0.000
TCM_004777 Theobroma cacao TCM_004777 I 0.000
TCM_005371 Theobroma cacao TCM_005371 I 0.000
TCM_025488 Theobroma cacao TCM_025488 I 0.000
TCM_037555 Theobroma cacao TCM_037555 I 0.000
Traes_2AL_5EE86C5BC Triticum aestivum Traes_2AL_5EE86C5BC I 0.000
Traes_2AL_B01AE830F Triticum aestivum Traes_2AL_B01AE830F I 0.000
Traes_2AL_E5B3B79F7 Triticum aestivum Traes_2AL_E5B3B79F7 I 0.000
Traes_2BL_560CCE975 Triticum aestivum Traes_2BL_560CCE975 I 0.000
Traes_2DL_25FD0FFB4 Triticum aestivum Traes_2DL_25FD0FFB4 I 0.000
Traes_2DL_6BD0572DF Triticum aestivum Traes_2DL_6BD0572DF I 0.000
Traes_4AL_9BF07972C Triticum aestivum Traes_4AL_9BF07972C I 0.000
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.000
Traes_4DL_4EE7DFCCD Triticum aestivum Traes_4DL_4EE7DFCCD I 0.000
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.000
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.000
Traes_7BS_7E91DE546 Triticum aestivum Traes_7BS_7E91DE546 I 0.000
Traes_7DS_469ED3135 Triticum aestivum Traes_7DS_469ED3135 I 0.000
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.000
TRIUR3_26633 Triticum urartu TRIUR3_26633 I 0.000
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.000
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I 0.000
VIT_11s0078g00480 Vitis vinifera VIT_11s0078g00480 I 0.000
AtMYB17 Vitis vinifera VIT_15s0046g03190 I 0.000
AtMYB93 Vitis vinifera VIT_18s0001g05670 I 0.000
GRMZM2G040924 Zea mays GRMZM2G040924 I 0.000
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.000