CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA04G10330
(
Glycine max
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
GLYMA04G10330
T193468_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA04G10330.1
GATA
221
258
CTHCGISSKSTPMMRKGPSGPRSLCNACGLFWANRGTL
Links
Other
GATA
family TFs
Other
Glycine max
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK04210.1
Cannabis sativa
PK04210.1
N
0.848
evm.TU.supercontig_3189.1
Carica papaya
evm.TU.supercontig_3189.1
N
0.853
Ca_14968
Cicer arietinum
Ca_14968
N
0.853
Cla022486
Citrullus lanatus
Cla022486
N
0.822
Ciclev10002056m.g
Citrus clementina
Ciclev10002056m.g
N
0.826
orange1.1g022924m.g
Citrus sinensis
orange1.1g022924m.g
N
0.826
Cucsa.160530
Cucumis sativus
Cucsa.160530
N
0.822
Eucgr.F02157
Eucalyptus grandis
Eucgr.F02157
N
0.848
gene26537-v1.0-hybrid
Fragaria vesca
gene26537-v1.0-hybrid
N
0.848
GLYMA06G10280
Glycine max
GLYMA06G10280
N
0.853
GLYMA02G37980
Glycine max
GLYMA02G37980
N
0.848
GLYMA14G36150
Glycine max
GLYMA14G36150
N
0.853
Gorai.010G033500
Gossypium raimondii
Gorai.010G033500
N
0.826
Gorai.009G279200
Gossypium raimondii
Gorai.009G279200
N
0.826
Gorai.005G097100
Gossypium raimondii
Gorai.005G097100
N
0.826
LjT45A20.70.nd
Lotus japonicus
LjT45A20.70.nd
N
0.820
chr1.CM0289.360.nc
Lotus japonicus
chr1.CM0289.360.nc
N
0.848
MDP0000303048
Malus domestica
MDP0000303048
N
0.853
cassava249.valid.m1
Manihot esculenta
cassava249.valid.m1
N
0.851
cassava1724.valid.m1
Manihot esculenta
cassava1724.valid.m1
N
0.853
MTR_5g066510
Medicago truncatula
MTR_5g066510
N
0.848
POPTR_0005s19580
Populus trichocarpa
POPTR_0005s19580
N
0.843
POPTR_0002s11150
Populus trichocarpa
POPTR_0002s11150
N
0.843
Pm004390
Prunus mume
Pm004390
N
0.853
PRUPE_ppa009340mg
Prunus persica
PRUPE_ppa009340mg
N
0.853
29596.m000720
Ricinus communis
29596.m000720
N
0.848
SapurV1A.0004s0630
Salix purpurea
SapurV1A.0004s0630
N
0.843
SapurV1A.0320s0100
Salix purpurea
SapurV1A.0320s0100
N
0.843
TCM_034530
Theobroma cacao
TCM_034530
N
0.826
TIFY1
Vitis vinifera
VIT_18s0001g07720
N
0.837