GLYMA05G05320 (Glycine max)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GLYMA05G05320 T193470_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.972
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.972
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA05G05320.1 GATA 7 42

Links

Other GATA family TFs
Other Glycine max TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31091 Aegilops tauschii F775_31091 N
AMTR_s00110p00030150 Amborella trichopoda AMTR_s00110p00030150 I
BRADI5G21950 Brachypodium distachyon BRADI5G21950 N
Bra000283 Brassica rapa Bra000283 I
Cla018863 Citrullus lanatus Cla018863 I
Cucsa.113040 Cucumis sativus Cucsa.113040 I
GLYMA02G45150 Glycine max GLYMA02G45150 I
GLYMA14G03600 Glycine max GLYMA14G03600 I
MLOC_36345 Hordeum vulgare MLOC_36345 N
Lus10020727.g Linum usitatissimum Lus10020727.g I
Lus10029805.g Linum usitatissimum Lus10029805.g I
OBART04G25920 Oryza barthii OBART04G25920 N
ORGLA04G0225800 Oryza glaberrima ORGLA04G0225800 N
OGLUM04G25420 Oryza glumaepatula OGLUM04G25420 N
OMERI04G21140 Oryza meridionalis OMERI04G21140 N
ONIVA04G24530 Oryza nivara ONIVA04G24530 N
OPUNC04G23010 Oryza punctata OPUNC04G23010 N
OPUNC04G23040 Oryza punctata OPUNC04G23040 N
ORUFI04G27110 Oryza rufipogon ORUFI04G27110 N
OS04G0618600 Oryza sativa OS04G0618600 N
Pavir.Gb00491 Panicum virgatum Pavir.Gb00491 N
Pavir.J18207 Panicum virgatum Pavir.J18207 N
gw1.147.92.1 Physcomitrella patens gw1.147.92.1 I
estExt_fgenesh1_pg.C_690022 Physcomitrella patens estExt_fgenesh1_pg.C_690022 I
estExt_fgenesh1_pg.C_680048 Physcomitrella patens estExt_fgenesh1_pg.C_680048 I
e_gw1.84.236.1 Physcomitrella patens e_gw1.84.236.1 I
SELMODRAFT_39143 Selaginella moellendorffii SELMODRAFT_39143 I
SELMODRAFT_114141 Selaginella moellendorffii SELMODRAFT_114141 I
SELMODRAFT_116654 Selaginella moellendorffii SELMODRAFT_116654 I
SELMODRAFT_118904 Selaginella moellendorffii SELMODRAFT_118904 I
SELMODRAFT_29179 Selaginella moellendorffii SELMODRAFT_29179 I
Si011759m.g Setaria italica Si011759m.g N
Sb06g028750 Sorghum bicolor Sb06g028750 N
Traes_2DL_46C827FAC Triticum aestivum Traes_2DL_46C827FAC N
Traes_2DL_46C827FAC1 Triticum aestivum Traes_2DL_46C827FAC1 N
Traes_2DL_0B1444B68 Triticum aestivum Traes_2DL_0B1444B68 N
Traes_2BL_A1F9C66CA Triticum aestivum Traes_2BL_A1F9C66CA N
Traes_2AL_67BC3AFBE Triticum aestivum Traes_2AL_67BC3AFBE N
TRIUR3_18209 Triticum urartu TRIUR3_18209 N
GRMZM2G080054 Zea mays GRMZM2G080054 N
GRMZM2G042920 Zea mays GRMZM2G042920 N