OPUNC10G16590 (Oryza punctata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OPUNC10G16590 T194501_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.853 0.944
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.853 0.944
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.847 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.843 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.838 0.861
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.833 0.833
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.833 0.833
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.833 0.833
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.832 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.832 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.832 0.806
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.830 0.778
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.830 0.778
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.823 0.806
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.823 0.806
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.823 0.806
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.819 0.778
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.819 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC10G16590.1 GATA 275 310

Links

Other GATA family TFs
Other Oryza punctata TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I 0.000
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.000
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I 0.000
scaffold_105455.1 Arabidopsis lyrata scaffold_105455.1 N 0.000
Al_scaffold_0007_1421 Arabidopsis lyrata Al_scaffold_0007_1421 N 0.000
fgenesh2_kg.8__404__AT5G44080.1 Arabidopsis lyrata fgenesh2_kg.8__404__AT5G44080.1 N 0.000
ABI5 Arabidopsis thaliana AT2G36270 D 0.000
AT5G44080 Arabidopsis thaliana AT5G44080 N 0.000
GBF4 Arabidopsis thaliana AT1G03970 N 0.000
Bostr.3148s0051 Boechera stricta Bostr.3148s0051 N 0.000
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N 0.000
BRADI2G56096 Brachypodium distachyon BRADI2G56096 I 0.000
Bo5g004230 Brassica oleracea Bo5g004230 N 0.000
Bo7g067030 Brassica oleracea Bo7g067030 N 0.000
Bra015281 Brassica rapa Bra015281 N 0.000
PK22350.1 Cannabis sativa PK22350.1 N 0.000
PK16522.1 Cannabis sativa PK16522.1 N 0.000
Cagra.12696s0002 Capsella grandiflora Cagra.12696s0002 N 0.000
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N 0.000
Carubv10027647m.g Capsella rubella Carubv10027647m.g N 0.000
Carubv10011573m.g Capsella rubella Carubv10011573m.g N 0.000
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N 0.000
Ca_04375 Cicer arietinum Ca_04375 N 0.000
Cla014026 Citrullus lanatus Cla014026 N 0.000
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I 0.000
Ciclev10002059m.g Citrus clementina Ciclev10002059m.g I 0.000
orange1.1g025985m.g Citrus sinensis orange1.1g025985m.g I 0.000
Cucsa.363740 Cucumis sativus Cucsa.363740 I 0.000
Thhalv10003246m.g Eutrema salsugineum Thhalv10003246m.g N 0.000
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N 0.000
gene08154-v1.0-hybrid Fragaria vesca gene08154-v1.0-hybrid N 0.000
GLYMA08G08220 Glycine max GLYMA08G08220 N 0.000
GLYMA10G36820 Glycine max GLYMA10G36820 N 0.000
GLYMA05G25200 Glycine max GLYMA05G25200 I 0.000
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I 0.000
Gorai.005G078500 Gossypium raimondii Gorai.005G078500 N 0.000
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.000
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I 0.000
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.000
MLOC_64571 Hordeum vulgare MLOC_64571 I 0.000
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.000
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.000
Lus10028575.g Linum usitatissimum Lus10028575.g N 0.000
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N 0.000
MDP0000706379 Malus domestica MDP0000706379 I 0.000
MDP0000208334 Malus domestica MDP0000208334 N 0.000
cassava12750.valid.m1 Manihot esculenta cassava12750.valid.m1 I 0.000
MTR_1g098590 Medicago truncatula MTR_1g098590 N 0.000
MTR_4g094390 Medicago truncatula MTR_4g094390 I 0.000
mgf009464m Mimulus guttatus mgf009464m N 0.000
mgf008848m Mimulus guttatus mgf008848m N 0.000
mgf015540m Mimulus guttatus mgf015540m I 0.000
GSMUA_Achr10G10440_001 Musa acuminata GSMUA_Achr10G10440_001 I 0.000
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I 0.000
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N 0.000
OBART05G17920 Oryza barthii OBART05G17920 I 0.000
OB05G25740 Oryza brachyantha OB05G25740 I 0.000
Pavir.J36143 Panicum virgatum Pavir.J36143 I 0.000
Pavir.J06257 Panicum virgatum Pavir.J06257 I 0.000
Pavir.J05659 Panicum virgatum Pavir.J05659 I 0.000
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I 0.000
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I 0.000
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I 0.000
Pm022545 Prunus mume Pm022545 I 0.000
29625.m000702 Ricinus communis 29625.m000702 I 0.000
29863.m001047 Ricinus communis 29863.m001047 N 0.000
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I 0.000
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I 0.000
SapurV1A.5129s0010 Salix purpurea SapurV1A.5129s0010 I 0.000
Si003247m.g Setaria italica Si003247m.g I 0.000
Solyc04g071510.2 Solanum lycopersicum Solyc04g071510.2 I 0.000
Sb03g040970 Sorghum bicolor Sb03g040970 I 0.000
TCM_006432 Theobroma cacao TCM_006432 I 0.000
TCM_035623 Theobroma cacao TCM_035623 N 0.000
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I 0.000
VIT_18s0072g00470 Vitis vinifera VIT_18s0072g00470 N 0.000
GRMZM5G858197 Zea mays GRMZM5G858197 I 0.000
GRMZM2G132868 Zea mays GRMZM2G132868 I 0.000