CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0007s03120
(
Populus trichocarpa
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
POPTR_0007s03120
T194889_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0007s03120.1
GATA
214
251
CQHCGISAKDTPAMRRGPAGPRTLCNACGLMWANKGTL
POPTR_0007s03120.2
GATA
214
251
CQHCGISAKDTPAMRRGPAGPRTLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Populus trichocarpa
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_18732
Aegilops tauschii
F775_18732
N
MLOC_78394
Hordeum vulgare
MLOC_78394
N
Traes_6BL_A62A29F7B
Triticum aestivum
Traes_6BL_A62A29F7B
N
Traes_6DS_931C28AF6
Triticum aestivum
Traes_6DS_931C28AF6
N
Traes_6BS_EE1BBAFD1
Triticum aestivum
Traes_6BS_EE1BBAFD1
N
Traes_6BS_CBD931158
Triticum aestivum
Traes_6BS_CBD931158
N
Traes_6BS_B8A0BF56F
Triticum aestivum
Traes_6BS_B8A0BF56F
N
Traes_6BS_A8901EA1F
Triticum aestivum
Traes_6BS_A8901EA1F
N
Traes_6BS_938E60C80
Triticum aestivum
Traes_6BS_938E60C80
N
Traes_6BS_82F5BF11F
Triticum aestivum
Traes_6BS_82F5BF11F
N
Traes_6BS_276ACF176
Triticum aestivum
Traes_6BS_276ACF176
N
Traes_6BL_4159688FC
Triticum aestivum
Traes_6BL_4159688FC
N
Traes_6AS_EE8BA0A57
Triticum aestivum
Traes_6AS_EE8BA0A57
N
Traes_6AS_E6F39D946
Triticum aestivum
Traes_6AS_E6F39D946
N
Traes_6AS_073DEE100
Triticum aestivum
Traes_6AS_073DEE100
N
Traes_1DL_0CDB6989D
Triticum aestivum
Traes_1DL_0CDB6989D
N
Traes_1BS_613E9DBA6
Triticum aestivum
Traes_1BS_613E9DBA6
N
Traes_1AL_C6CACDF78
Triticum aestivum
Traes_1AL_C6CACDF78
N
TRIUR3_06344
Triticum urartu
TRIUR3_06344
N