POPTR_0008s03880 (Populus trichocarpa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 POPTR_0008s03880 T194893_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.867 0.972
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.848 0.944
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.847 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.847 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.847 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.847 0.806
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.847 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.843 0.833
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.843 0.833
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.843 0.833
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.843 0.833
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.832 0.806
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.832 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.823 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.823 0.806
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.778
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.750
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s03880.1 GATA 258 293

Links

Other GATA family TFs
Other Populus trichocarpa TFs

613 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000012405 Ailuropoda melanoleuca ENSAMEG00000012405 I 0.000
ENSAMEG00000015695 Ailuropoda melanoleuca ENSAMEG00000015695 I 0.000
ENSAMEG00000018335 Ailuropoda melanoleuca ENSAMEG00000018335 I 0.000
Alligator_sinensis_CCG000894.1 Alligator sinensis Alligator_sinensis_CCG000894.1 I 0.000
Alligator_sinensis_CCG004283.1 Alligator sinensis Alligator_sinensis_CCG004283.1 I 0.000
Alligator_sinensis_CCG009651.1 Alligator sinensis Alligator_sinensis_CCG009651.1 I 0.000
ENSAPLG00000009204 Anas platyrhynchos ENSAPLG00000009204 I 0.000
ENSAPLG00000011284 Anas platyrhynchos ENSAPLG00000011284 I 0.000
FOSL2 Anolis carolinensis ENSACAG00000009506 I 0.000
FOS Anolis carolinensis ENSACAG00000016921 I 0.000
Afo_R008621 Aptenodytes forsteri Afo_R008621 I 0.000
ENSAMXG00000008191 Astyanax mexicanus ENSAMXG00000008191 I 0.000
ENSAMXG00000013765 Astyanax mexicanus ENSAMXG00000013765 I 0.000
ENSAMXG00000013783 Astyanax mexicanus ENSAMXG00000013783 I 0.000
ENSAMXG00000014513 Astyanax mexicanus ENSAMXG00000014513 I 0.000
ENSAMXG00000015019 Astyanax mexicanus ENSAMXG00000015019 I 0.000
ENSAMXG00000018054 Astyanax mexicanus ENSAMXG00000018054 I 0.000
ENSBTAP00000005660-D1 Bos grunniens ENSBTAP00000005660-D1 I 0.000
ENSBTAP00000010762-D1 Bos grunniens ENSBTAP00000010762-D1 I 0.000
ENSBTAP00000032838-D1 Bos grunniens ENSBTAP00000032838-D1 I 0.000
FOS Bos taurus ENSBTAG00000004322 I 0.000
FOSB Bos taurus ENSBTAG00000008182 I 0.000
FOSL2 Bos taurus ENSBTAG00000023929 I 0.000
estExt_gwp.C_680102 Branchiostoma floridae estExt_gwp.C_680102 I 0.000
Brh_R007294 Buceros rhinoceros Brh_R007294 I 0.000
FOSL2 Callithrix jacchus ENSCJAG00000009019 I 0.000
FOSB Callithrix jacchus ENSCJAG00000012636 I 0.000
FOS Callithrix jacchus ENSCJAG00000020633 I 0.000
Aan_R011420 Calypte anna Aan_R011420 I 0.000
FOSB Canis familiaris ENSCAFG00000004443 I 0.000
FOSL2 Canis familiaris ENSCAFG00000005212 I 0.000
FOS Canis familiaris ENSCAFG00000017040 I 0.000
ENSCPOG00000003247 Cavia porcellus ENSCPOG00000003247 I 0.000
FOSB Cavia porcellus ENSCPOG00000015608 I 0.000
ENSCPOG00000020774 Cavia porcellus ENSCPOG00000020774 I 0.000
Cmyd_10002048 Chelonia mydas Cmyd_10002048 I 0.000
Cmyd_10014529 Chelonia mydas Cmyd_10014529 I 0.000
ENSCSAG00000010278 Chlorocebus sabaeus ENSCSAG00000010278 I 0.000
ENSCSAG00000012136 Chlorocebus sabaeus ENSCSAG00000012136 I 0.000
ENSCING00000023347 Ciona intestinalis ENSCING00000023347 I 0.000
ENSCSAVG00000004996 Ciona savignyi ENSCSAVG00000004996 I 0.000
fosl1a Danio rerio ENSDARG00000015355 I 0.000
fosab Danio rerio ENSDARG00000031683 I 0.000
fosaa Danio rerio ENSDARG00000040135 I 0.000
fosl2 Danio rerio ENSDARG00000040623 I 0.000
fosb Danio rerio ENSDARG00000055751 I 0.000
si:ch211-153j24.3 Danio rerio ENSDARG00000068428 I 0.000
FOSB Dasypus novemcinctus ENSDNOG00000008748 I 0.000
FOS Dasypus novemcinctus ENSDNOG00000031516 I 0.000
ENSDORG00000003738 Dipodomys ordii ENSDORG00000003738 I 0.000
Fosb Dipodomys ordii ENSDORG00000008112 I 0.000
ENSDORG00000008993 Dipodomys ordii ENSDORG00000008993 I 0.000
FOSL2 Echinops telfairi ENSETEG00000011721 I 0.000
ENSETEG00000017818 Echinops telfairi ENSETEG00000017818 I 0.000
FOS Equus caballus ENSECAG00000014260 I 0.000
FOSL2 Equus caballus ENSECAG00000017657 I 0.000
FOSB Equus caballus ENSECAG00000018002 I 0.000
FOSL2 Erinaceus europaeus ENSEEUG00000007937 I 0.000
FOS Erinaceus europaeus ENSEEUG00000013514 I 0.000
FOS Felis catus ENSFCAG00000025370 I 0.000
FOSL2 Felis catus ENSFCAG00000029462 I 0.000
FOSB Felis catus ENSFCAG00000030571 I 0.000
ENSFALG00000006355 Ficedula albicollis ENSFALG00000006355 I 0.000
ENSFALG00000012753 Ficedula albicollis ENSFALG00000012753 I 0.000
ENSGMOG00000002017 Gadus morhua ENSGMOG00000002017 I 0.000
ENSGMOG00000003382 Gadus morhua ENSGMOG00000003382 I 0.000
ENSGMOG00000011046 Gadus morhua ENSGMOG00000011046 I 0.000
ENSGMOG00000011052 Gadus morhua ENSGMOG00000011052 I 0.000
ENSGMOG00000015393 Gadus morhua ENSGMOG00000015393 I 0.000
FOSL2 Gallus gallus ENSGALG00000010036 I 0.000
FOS Gallus gallus ENSGALG00000028037 I 0.000
fosaa Gasterosteus aculeatus ENSGACG00000007617 I 0.000
fosb Gasterosteus aculeatus ENSGACG00000009792 I 0.000
fosab Gasterosteus aculeatus ENSGACG00000010476 I 0.000
si:ch211-153j24.3 Gasterosteus aculeatus ENSGACG00000010481 I 0.000
fosl2 Gasterosteus aculeatus ENSGACG00000012956 I 0.000
fosl1a Gasterosteus aculeatus ENSGACG00000017059 I 0.000
Gfo_R010997 Geospiza fortis Gfo_R010997 I 0.000
FOS Gorilla gorilla ENSGGOG00000000527 I 0.000
FOSL2 Gorilla gorilla ENSGGOG00000009435 I 0.000
FOSB Gorilla gorilla ENSGGOG00000010952 I 0.000
FOSL2 Homo sapiens ENSG00000075426 D 0.000
FOSB Homo sapiens ENSG00000125740 D 0.000
FOS Homo sapiens ENSG00000170345 D 0.000
ENSSTOG00000003005 Ictidomys tridecemlineatus ENSSTOG00000003005 I 0.000
ENSSTOG00000022839 Ictidomys tridecemlineatus ENSSTOG00000022839 I 0.000
ENSSTOG00000028949 Ictidomys tridecemlineatus ENSSTOG00000028949 I 0.000
ENSLACG00000007288 Latimeria chalumnae ENSLACG00000007288 I 0.000
ENSLACG00000013070 Latimeria chalumnae ENSLACG00000013070 I 0.000
ENSLACG00000013874 Latimeria chalumnae ENSLACG00000013874 I 0.000
ENSLACG00000018157 Latimeria chalumnae ENSLACG00000018157 I 0.000
ENSLOCG00000000771 Lepisosteus oculatus ENSLOCG00000000771 I 0.000
ENSLOCG00000010507 Lepisosteus oculatus ENSLOCG00000010507 I 0.000
ENSLOCG00000010517 Lepisosteus oculatus ENSLOCG00000010517 I 0.000
ENSLOCG00000014630 Lepisosteus oculatus ENSLOCG00000014630 I 0.000
ENSLOCG00000017169 Lepisosteus oculatus ENSLOCG00000017169 I 0.000
LDEC018714 Leptinotarsa decemlineata LDEC018714 I 0.000
FOSB Loxodonta africana ENSLAFG00000008834 I 0.000
FOSL2 Loxodonta africana ENSLAFG00000009035 I 0.000
ENSP00000245919 Macaca fascicularis ENSP00000245919 I 0.000
ENSP00000264716 Macaca fascicularis ENSP00000264716 I 0.000
ENSP00000306245 Macaca fascicularis ENSP00000306245 I 0.000
ENSMMUG00000010574 Macaca mulatta ENSMMUG00000010574 I 0.000
FOSL2 Macaca mulatta ENSMMUG00000014464 I 0.000
ENSMEUG00000004976 Macropus eugenii ENSMEUG00000004976 I 0.000
ENSMEUG00000012081 Macropus eugenii ENSMEUG00000012081 I 0.000
FOSL2 Meleagris gallopavo ENSMGAG00000010468 I 0.000
ENSMICG00000001423 Microcebus murinus ENSMICG00000001423 I 0.000
FOSB Microcebus murinus ENSMICG00000001809 I 0.000
FOS Microcebus murinus ENSMICG00000016026 I 0.000
FOS Monodelphis domestica ENSMODG00000005927 I 0.000
FOSL2 Monodelphis domestica ENSMODG00000015575 I 0.000
FOSB Monodelphis domestica ENSMODG00000021545 I 0.000
ENSMPUG00000005914 Mustela putorius furo ENSMPUG00000005914 I 0.000
ENSMPUG00000009153 Mustela putorius furo ENSMPUG00000009153 I 0.000
ENSMPUG00000017989 Mustela putorius furo ENSMPUG00000017989 I 0.000
Fosb Mus musculus ENSMUSG00000003545 D 0.000
Fos Mus musculus ENSMUSG00000021250 D 0.000
Fosl2 Mus musculus ENSMUSG00000029135 D 0.000
Myotis_brandtii_FOS_10012946 Myotis brandtii Myotis_brandtii_FOS_10012946 I 0.000
Myotis_brandtii_Fosb_10006013 Myotis brandtii Myotis_brandtii_Fosb_10006013 I 0.000
Myotis_brandtii_FOSL2_10031162 Myotis brandtii Myotis_brandtii_FOSL2_10031162 I 0.000
FOSL2 Myotis lucifugus ENSMLUG00000000200 I 0.000
FOS Myotis lucifugus ENSMLUG00000003729 I 0.000
FOSB Myotis lucifugus ENSMLUG00000009003 I 0.000
ENSNLEG00000002090 Nomascus leucogenys ENSNLEG00000002090 I 0.000
ENSNLEG00000015308 Nomascus leucogenys ENSNLEG00000015308 I 0.000
ENSNLEG00000016463 Nomascus leucogenys ENSNLEG00000016463 I 0.000
FOSL2 Ochotona princeps ENSOPRG00000011952 I 0.000
FOS Ochotona princeps ENSOPRG00000012005 I 0.000
Ogr08028 Ophisaurus gracilis Ogr08028 I 0.000
Ogr13525 Ophisaurus gracilis Ogr13525 I 0.000
ENSONIG00000003711 Oreochromis niloticus ENSONIG00000003711 I 0.000
ENSONIG00000005463 Oreochromis niloticus ENSONIG00000005463 I 0.000
ENSONIG00000015264 Oreochromis niloticus ENSONIG00000015264 I 0.000
ENSONIG00000015266 Oreochromis niloticus ENSONIG00000015266 I 0.000
ENSONIG00000019549 Oreochromis niloticus ENSONIG00000019549 I 0.000
ENSONIG00000020185 Oreochromis niloticus ENSONIG00000020185 I 0.000
FOS Ornithorhynchus anatinus ENSOANG00000005064 I 0.000
FOSL2 Ornithorhynchus anatinus ENSOANG00000005680 I 0.000
FOSL2 Oryctolagus cuniculus ENSOCUG00000010706 I 0.000
FOS Oryctolagus cuniculus ENSOCUG00000021506 I 0.000
ENSOCUG00000023019 Oryctolagus cuniculus ENSOCUG00000023019 I 0.000
fosl1a Oryzias latipes ENSORLG00000002045 I 0.000
FOSB Oryzias latipes ENSORLG00000006665 I 0.000
fosaa Oryzias latipes ENSORLG00000016509 I 0.000
c-fos Oryzias latipes ENSORLG00000017502 I 0.000
fosl2 Oryzias latipes ENSORLG00000018204 I 0.000
FOSL2 Otolemur garnettii ENSOGAG00000007339 I 0.000
FOSB Otolemur garnettii ENSOGAG00000013790 I 0.000
FOS Otolemur garnettii ENSOGAG00000032356 I 0.000
ENSOARG00000001783 Ovis aries ENSOARG00000001783 I 0.000
ENSOARG00000009983 Ovis aries ENSOARG00000009983 I 0.000
ENSOARG00000019483 Ovis aries ENSOARG00000019483 I 0.000
FOS Pan troglodytes ENSPTRG00000006553 I 0.000
ENSPANG00000002665 Papio anubis ENSPANG00000002665 I 0.000
ENSPANG00000020551 Papio anubis ENSPANG00000020551 I 0.000
ENSPANG00000023125 Papio anubis ENSPANG00000023125 I 0.000
ENSPSIG00000003916 Pelodiscus sinensis ENSPSIG00000003916 I 0.000
ENSPSIG00000005821 Pelodiscus sinensis ENSPSIG00000005821 I 0.000
ENSPSIG00000017598 Pelodiscus sinensis ENSPSIG00000017598 I 0.000
ENSPMAG00000003458 Petromyzon marinus ENSPMAG00000003458 I 0.000
ENSPMAG00000006157 Petromyzon marinus ENSPMAG00000006157 I 0.000
ENSPFOG00000007924 Poecilia formosa ENSPFOG00000007924 I 0.000
ENSPFOG00000010300 Poecilia formosa ENSPFOG00000010300 I 0.000
ENSPFOG00000010981 Poecilia formosa ENSPFOG00000010981 I 0.000
ENSPFOG00000015030 Poecilia formosa ENSPFOG00000015030 I 0.000
ENSPFOG00000021864 Poecilia formosa ENSPFOG00000021864 I 0.000
ENSPFOG00000022460 Poecilia formosa ENSPFOG00000022460 I 0.000
Pvit_01215 Pogona vitticeps Pvit_01215 I 0.000
Pvit_16646 Pogona vitticeps Pvit_16646 I 0.000
Pvit_16996 Pogona vitticeps Pvit_16996 I 0.000
ENSPPYG00000006002 Pongo abelii ENSPPYG00000006002 I 0.000
ENSPPYG00000010121 Pongo abelii ENSPPYG00000010121 I 0.000
FOS Procavia capensis ENSPCAG00000001765 I 0.000
FOSB Procavia capensis ENSPCAG00000007461 I 0.000
FOSL2 Procavia capensis ENSPCAG00000007502 I 0.000
FOS Pteropus vampyrus ENSPVAG00000000671 I 0.000
FOSB Pteropus vampyrus ENSPVAG00000001332 I 0.000
FOSL2 Pteropus vampyrus ENSPVAG00000006162 I 0.000
Fos Rattus norvegicus ENSRNOG00000008015 I 0.000
Fosb Rattus norvegicus ENSRNOG00000046667 I 0.000
Fosl2 Rattus norvegicus ENSRNOG00000052357 I 0.000
ENSSHAG00000017780 Sarcophilus harrisii ENSSHAG00000017780 I 0.000
FOS Sus scrofa ENSSSCG00000002383 I 0.000
ENSSSCG00000027396 Sus scrofa ENSSSCG00000027396 I 0.000
FOSL2 Taeniopygia guttata ENSTGUG00000002556 I 0.000
FOS Taeniopygia guttata ENSTGUG00000012217 I 0.000
fosl2 Takifugu rubripes ENSTRUG00000006404 I 0.000
si:ch211-153j24.3 Takifugu rubripes ENSTRUG00000010431 I 0.000
fosab Takifugu rubripes ENSTRUG00000010579 I 0.000
fosb Takifugu rubripes ENSTRUG00000010593 I 0.000
fosl1a Takifugu rubripes ENSTRUG00000012068 I 0.000
fosaa Takifugu rubripes ENSTRUG00000018314 I 0.000
ENSTSYG00000008393 Tarsius syrichta ENSTSYG00000008393 I 0.000
ENSTSYG00000013658 Tarsius syrichta ENSTSYG00000013658 I 0.000
fosb Tetraodon nigroviridis ENSTNIG00000007735 I 0.000
si:ch211-153j24.3 Tetraodon nigroviridis ENSTNIG00000016356 I 0.000
fosab Tetraodon nigroviridis ENSTNIG00000016357 I 0.000
fosl1a Tetraodon nigroviridis ENSTNIG00000016821 I 0.000
fosaa Tetraodon nigroviridis ENSTNIG00000017405 I 0.000
fosl2 Tetraodon nigroviridis ENSTNIG00000018774 I 0.000
TC008201 Tribolium castaneum TC008201 I 0.000
FOSL2 Tupaia belangeri ENSTBEG00000002195 I 0.000
ENSTBEG00000007122 Tupaia belangeri ENSTBEG00000007122 I 0.000
FOSB Tupaia belangeri ENSTBEG00000010222 I 0.000
FOS Tursiops truncatus ENSTTRG00000007779 I 0.000
FOSB Tursiops truncatus ENSTTRG00000008316 I 0.000
FOSL2 Tursiops truncatus ENSTTRG00000012544 I 0.000
Tal_R012094 Tyto alba Tal_R012094 I 0.000
FOS Vicugna pacos ENSVPAG00000003894 I 0.000
FOSB Vicugna pacos ENSVPAG00000010030 I 0.000
fos.L Xenopus laevis XB-GENE-17337595 I 0.000
fosl2.L Xenopus laevis XB-GENE-6252038 I 0.000
fos.S Xenopus laevis XB-GENE-866822 I 0.000
fosl2 Xenopus tropicalis XB-GENE-6258093 I 0.000
fosb Xenopus tropicalis XB-GENE-6258697 I 0.000
fos Xenopus tropicalis XB-GENE-866811 I 0.000
ENSXMAG00000013157 Xiphophorus maculatus ENSXMAG00000013157 I 0.000
ENSXMAG00000013196 Xiphophorus maculatus ENSXMAG00000013196 I 0.000
ENSXMAG00000014809 Xiphophorus maculatus ENSXMAG00000014809 I 0.000
ENSXMAG00000018459 Xiphophorus maculatus ENSXMAG00000018459 I 0.000
ENSXMAG00000018663 Xiphophorus maculatus ENSXMAG00000018663 I 0.000