CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_69567
(
Selaginella moellendorffii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SELMODRAFT_69567
T195169_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.848
0.861
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.848
0.861
GATA7
M02004_2.00
Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN
PBM
Weirauch et al.(2014)
pTH7658
0.848
0.889
GATA3
M02003_2.00
Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN
PBM
Weirauch et al.(2014)
pTH7657
0.837
0.833
GATA10
M01994_2.00
Arabidopsis thaliana
CAGATCTA
TAGATCTG
PBM
Weirauch et al.(2014)
pTH7615
0.837
0.806
GATA11
M01995_2.00
Arabidopsis thaliana
CAGATCTH
DAGATCTG
PBM
Weirauch et al.(2014)
pTH7486
0.837
0.806
GATA11
M06882_2.00
Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD
Dap-seq
OMalley et al.(2016)
GATA11_col_a
0.837
0.806
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.833
0.806
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.833
0.806
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.833
0.806
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.833
0.806
GATA4
M00727_2.00
Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN
PBM
Chang et al.(2013)
pTH7196
0.830
0.806
GATA4
M06891_2.00
Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND
Dap-seq
OMalley et al.(2016)
GATA4_col_a
0.830
0.806
GATA9
M02002_2.00
Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN
PBM
Weirauch et al.(2014)
pTH7378
0.823
0.806
GATA12
M00863_2.00
Arabidopsis thaliana
NNNGATBN
NVATCNNN
PBM
Franco-Zorrilla et al.(2014)
GATA12
0.823
0.806
GATA12
M06895_2.00
Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH
Dap-seq
OMalley et al.(2016)
GATA12_col_a
0.823
0.806
GATA12
M06896_2.00
Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR
Dap-seq
OMalley et al.(2016)
GATA12_colamp_a
0.823
0.806
GATA8
M02000_2.00
Arabidopsis thaliana
NNGATYYVN
NBRRATCNN
PBM
Weirauch et al.(2014)
pTH7665
0.819
0.778
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ31776
GATA
3
38
CSHCQTQKTPQWRAGPLGPKTLCNACGVRFKSGRLL
Links
Other
GATA
family TFs
Other
Selaginella moellendorffii
TFs
609 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000003626
Ailuropoda melanoleuca
ENSAMEG00000003626
I
0.000
ENSAMEG00000008932
Ailuropoda melanoleuca
ENSAMEG00000008932
I
0.000
Alligator_sinensis_CCG013281.1
Alligator sinensis
Alligator_sinensis_CCG013281.1
I
0.000
Alligator_sinensis_CCG017455.1
Alligator sinensis
Alligator_sinensis_CCG017455.1
I
0.000
ENSAPLG00000010915
Anas platyrhynchos
ENSAPLG00000010915
I
0.000
ARID5B
Anolis carolinensis
ENSACAG00000010922
I
0.000
GB52601
Apis mellifera
GB52601
I
0.000
Afo_R009473
Aptenodytes forsteri
Afo_R009473
I
0.000
ENSAMXG00000005409
Astyanax mexicanus
ENSAMXG00000005409
I
0.000
ENSAMXG00000006897
Astyanax mexicanus
ENSAMXG00000006897
I
0.000
ENSAMXG00000012004
Astyanax mexicanus
ENSAMXG00000012004
I
0.000
ENSBTAP00000008847-D1
Bos grunniens
ENSBTAP00000008847-D1
I
0.000
ENSBTAP00000026200-D1
Bos grunniens
ENSBTAP00000026200-D1
I
0.000
ARID5B
Bos taurus
ENSBTAG00000006729
I
0.000
ARID5A
Bos taurus
ENSBTAG00000014090
I
0.000
fgenesh2_pg.scaffold_164000022
Branchiostoma floridae
fgenesh2_pg.scaffold_164000022
I
0.000
Brh_R002693
Buceros rhinoceros
Brh_R002693
I
0.000
ARID5B
Callithrix jacchus
ENSCJAG00000007072
I
0.000
ARID5A
Callithrix jacchus
ENSCJAG00000007759
I
0.000
Aan_R006833
Calypte anna
Aan_R006833
I
0.000
Cflo_07446--XP_395512.3_APIME
Camponotus floridanus
Cflo_07446--XP_395512.3_APIME
I
0.000
ARID5A
Canis familiaris
ENSCAFG00000006546
I
0.000
ARID5B
Canis familiaris
ENSCAFG00000012991
I
0.000
CapteG220448
Capitella teleta
CapteG220448
I
0.000
ENSCPOG00000003685
Cavia porcellus
ENSCPOG00000003685
I
0.000
ARID5A
Cavia porcellus
ENSCPOG00000026444
I
0.000
Cmyd_10001620
Chelonia mydas
Cmyd_10001620
I
0.000
Cmyd_10021475
Chelonia mydas
Cmyd_10021475
I
0.000
ENSCSAG00000007410
Chlorocebus sabaeus
ENSCSAG00000007410
I
0.000
ENSCSAG00000017355
Chlorocebus sabaeus
ENSCSAG00000017355
I
0.000
ARID5B
Choloepus hoffmanni
ENSCHOG00000011695
I
0.000
ENSCING00000013307
Ciona intestinalis
ENSCING00000013307
I
0.000
arid5b
Danio rerio
ENSDARG00000037196
I
0.000
zgc:77151
Danio rerio
ENSDARG00000054307
I
0.000
arid6
Danio rerio
ENSDARG00000069988
D
0.000
ARID5A
Dasypus novemcinctus
ENSDNOG00000035690
I
0.000
ARID5B
Dasypus novemcinctus
ENSDNOG00000043861
I
0.000
Arid5a
Dipodomys ordii
ENSDORG00000002540
I
0.000
ARID5B
Echinops telfairi
ENSETEG00000002612
I
0.000
ARID5B
Equus caballus
ENSECAG00000019795
I
0.000
ARID5A
Equus caballus
ENSECAG00000023667
I
0.000
ARID5B
Erinaceus europaeus
ENSEEUG00000000691
I
0.000
ARID5A
Erinaceus europaeus
ENSEEUG00000008247
I
0.000
ARID5A
Felis catus
ENSFCAG00000024950
I
0.000
ARID5B
Felis catus
ENSFCAG00000026767
I
0.000
ENSFALG00000000299
Ficedula albicollis
ENSFALG00000000299
I
0.000
ENSFALG00000013304
Ficedula albicollis
ENSFALG00000013304
I
0.000
ENSGMOG00000004984
Gadus morhua
ENSGMOG00000004984
I
0.000
ENSGMOG00000008075
Gadus morhua
ENSGMOG00000008075
I
0.000
ENSGALG00000002991
Gallus gallus
ENSGALG00000002991
I
0.000
ENSGALG00000027335
Gallus gallus
ENSGALG00000027335
I
0.000
arid5b
Gasterosteus aculeatus
ENSGACG00000010603
I
0.000
ENSGACG00000015846
Gasterosteus aculeatus
ENSGACG00000015846
I
0.000
Gfo_R015732
Geospiza fortis
Gfo_R015732
I
0.000
ARID5B
Gorilla gorilla
ENSGGOG00000004127
I
0.000
ARID5A
Gorilla gorilla
ENSGGOG00000017068
I
0.000
Hsal_01506--XP_395512.3_APIME
Harpegnathos saltator
Hsal_01506--XP_395512.3_APIME
I
0.000
ARID5B
Homo sapiens
ENSG00000150347
D
0.000
ARID5A
Homo sapiens
ENSG00000196843
I
0.000
ENSSTOG00000019546
Ictidomys tridecemlineatus
ENSSTOG00000019546
I
0.000
ENSSTOG00000023423
Ictidomys tridecemlineatus
ENSSTOG00000023423
I
0.000
ISCW010123
Ixodes scapularis
ISCW010123
I
0.000
ENSLACG00000014124
Latimeria chalumnae
ENSLACG00000014124
I
0.000
ENSLACG00000015032
Latimeria chalumnae
ENSLACG00000015032
I
0.000
ENSLOCG00000005151
Lepisosteus oculatus
ENSLOCG00000005151
I
0.000
ENSLOCG00000006809
Lepisosteus oculatus
ENSLOCG00000006809
I
0.000
ENSLOCG00000012316
Lepisosteus oculatus
ENSLOCG00000012316
I
0.000
ENSLOCG00000015055
Lepisosteus oculatus
ENSLOCG00000015055
I
0.000
ARID5A
Loxodonta africana
ENSLAFG00000009162
I
0.000
ARID5B
Loxodonta africana
ENSLAFG00000015576
I
0.000
ENSP00000279873
Macaca fascicularis
ENSP00000279873
I
0.000
ARID5B
Macaca mulatta
ENSMMUG00000000424
I
0.000
ARID5A
Macaca mulatta
ENSMMUG00000030744
I
0.000
ENSMEUG00000005354
Macropus eugenii
ENSMEUG00000005354
I
0.000
ENSMEUG00000014406
Macropus eugenii
ENSMEUG00000014406
I
0.000
ARID5B
Meleagris gallopavo
ENSMGAG00000003626
I
0.000
ENSMICG00000010866
Microcebus murinus
ENSMICG00000010866
I
0.000
ARID5A
Monodelphis domestica
ENSMODG00000008611
I
0.000
ARID5B
Monodelphis domestica
ENSMODG00000017102
I
0.000
ENSMPUG00000008907
Mustela putorius furo
ENSMPUG00000008907
I
0.000
ENSMPUG00000011076
Mustela putorius furo
ENSMPUG00000011076
I
0.000
Arid5b
Mus musculus
ENSMUSG00000019947
D
0.000
Arid5a
Mus musculus
ENSMUSG00000037447
D
0.000
Myotis_brandtii_ARID5A_10013684
Myotis brandtii
Myotis_brandtii_ARID5A_10013684
I
0.000
Myotis_brandtii_ARID5B_10031403
Myotis brandtii
Myotis_brandtii_ARID5B_10031403
I
0.000
ARID5A
Myotis lucifugus
ENSMLUG00000003208
I
0.000
ARID5B
Myotis lucifugus
ENSMLUG00000013447
I
0.000
NV18117
Nasonia vitripennis
NV18117
I
0.000
NEMVEDRAFT_v1g81183
Nematostella vectensis
NEMVEDRAFT_v1g81183
I
0.000
ENSNLEG00000012110
Nomascus leucogenys
ENSNLEG00000012110
I
0.000
ARID5A
Ochotona princeps
ENSOPRG00000015571
I
0.000
Ocbimv22018673m.g
Octopus bimaculoides
Ocbimv22018673m.g
I
0.000
Ogr03010
Ophisaurus gracilis
Ogr03010
I
0.000
Ogr08677
Ophisaurus gracilis
Ogr08677
I
0.000
ENSONIG00000000889
Oreochromis niloticus
ENSONIG00000000889
I
0.000
ENSONIG00000010644
Oreochromis niloticus
ENSONIG00000010644
I
0.000
ARID5B
Ornithorhynchus anatinus
ENSOANG00000015260
I
0.000
ARID5A
Oryctolagus cuniculus
ENSOCUG00000012101
I
0.000
ARID5B
Oryctolagus cuniculus
ENSOCUG00000027029
I
0.000
ENSORLG00000004756
Oryzias latipes
ENSORLG00000004756
I
0.000
ENSORLG00000011620
Oryzias latipes
ENSORLG00000011620
I
0.000
ENSORLG00000018351
Oryzias latipes
ENSORLG00000018351
I
0.000
ARID5A
Otolemur garnettii
ENSOGAG00000004116
I
0.000
ARID5B
Otolemur garnettii
ENSOGAG00000015939
I
0.000
ENSOARG00000004403
Ovis aries
ENSOARG00000004403
I
0.000
ARID5B
Pan troglodytes
ENSPTRG00000002534
I
0.000
ARID5A
Pan troglodytes
ENSPTRG00000012234
I
0.000
ENSPANG00000012565
Papio anubis
ENSPANG00000012565
I
0.000
ENSPANG00000022067
Papio anubis
ENSPANG00000022067
I
0.000
e_gw.4.260.1_CONSTRUCT
PBM CONSTRUCTS
e_gw.4.260.1_CONSTRUCT
D
0.000
ENSPSIG00000010908
Pelodiscus sinensis
ENSPSIG00000010908
I
0.000
ENSPSIG00000014127
Pelodiscus sinensis
ENSPSIG00000014127
I
0.000
ENSPMAG00000002699
Petromyzon marinus
ENSPMAG00000002699
I
0.000
ENSPMAG00000009067
Petromyzon marinus
ENSPMAG00000009067
I
0.000
ENSPFOG00000010024
Poecilia formosa
ENSPFOG00000010024
I
0.000
ENSPFOG00000012334
Poecilia formosa
ENSPFOG00000012334
I
0.000
ENSPFOG00000012795
Poecilia formosa
ENSPFOG00000012795
I
0.000
ENSPFOG00000022560
Poecilia formosa
ENSPFOG00000022560
I
0.000
Pvit_18395
Pogona vitticeps
Pvit_18395
I
0.000
ENSPPYG00000002417
Pongo abelii
ENSPPYG00000002417
I
0.000
ENSPPYG00000012072
Pongo abelii
ENSPPYG00000012072
I
0.000
ARID5B
Procavia capensis
ENSPCAG00000002044
I
0.000
ARID5A
Procavia capensis
ENSPCAG00000006363
I
0.000
ARID5A
Pteropus vampyrus
ENSPVAG00000009400
I
0.000
ARID5B
Pteropus vampyrus
ENSPVAG00000010482
I
0.000
Arid5a
Rattus norvegicus
ENSRNOG00000015382
D
0.000
Sakowv30045810m.g
Saccoglossus kowalevskii
Sakowv30045810m.g
I
0.000
ENSSHAG00000012252
Sarcophilus harrisii
ENSSHAG00000012252
I
0.000
ENSSHAG00000018209
Sarcophilus harrisii
ENSSHAG00000018209
I
0.000
ARID5B
Sorex araneus
ENSSARG00000002423
I
0.000
SMAR000821
Strigamia maritima
SMAR000821
I
0.000
SPU_011640
Strongylocentrotus purpuratus
SPU_011640
I
0.000
ARID5A
Sus scrofa
ENSSSCG00000008123
I
0.000
ARID5B
Sus scrofa
ENSSSCG00000010219
I
0.000
ARID5B
Taeniopygia guttata
ENSTGUG00000005270
I
0.000
ENSTGUG00000015609
Taeniopygia guttata
ENSTGUG00000015609
I
0.000
ENSTRUG00000001547
Takifugu rubripes
ENSTRUG00000001547
I
0.000
arid5b
Takifugu rubripes
ENSTRUG00000010671
I
0.000
ENSTSYG00000010758
Tarsius syrichta
ENSTSYG00000010758
I
0.000
tetur19g00310
Tetranychus urticae
tetur19g00310
I
0.000
ENSTNIG00000006278
Tetraodon nigroviridis
ENSTNIG00000006278
I
0.000
arid5b
Tetraodon nigroviridis
ENSTNIG00000007478
I
0.000
ENSTNIG00000013457
Tetraodon nigroviridis
ENSTNIG00000013457
I
0.000
ARID5A
Tursiops truncatus
ENSTTRG00000007812
I
0.000
Tal_R007047
Tyto alba
Tal_R007047
I
0.000
arid5b
Xenopus tropicalis
XB-GENE-1007579
I
0.000
ENSXMAG00000001883
Xiphophorus maculatus
ENSXMAG00000001883
I
0.000
ENSXMAG00000011937
Xiphophorus maculatus
ENSXMAG00000011937
I
0.000
ENSXMAG00000018209
Xiphophorus maculatus
ENSXMAG00000018209
I
0.000
L798_01524
Zootermopsis nevadensis
L798_01524
I
0.000