CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SEPMUDRAFT_36665
(
Sphaerulina musiva
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SEPMUDRAFT_36665
T195175_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GZF3
M00051_2.00
Saccharomyces cerevisiae
HGATAAGN
NCTTATCD
PBM
Badis et al.(2008)
GZF3_2167
0.856
0.829
GZF3
M01548_2.00
Saccharomyces cerevisiae
NNGATWNN
NNWATCNN
PBM
Zhu et al.(2009)
Gzf3
0.856
0.829
GZF3
M07480_2.00
Saccharomyces cerevisiae
HGATAASN
NSTTATCD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0309.1
0.856
0.829
GZF3
M08562_2.00
Saccharomyces cerevisiae
GATAAG
CTTATC
Misc
DeBoer et al.(2011)
YJL110C_593
0.856
0.829
DAL80
M00052_2.00
Saccharomyces cerevisiae
NNNNTANNNN
NNNNTANNNN
PBM
Badis et al.(2008)
DAL80_2083
0.851
0.800
DAL80
M07481_2.00
Saccharomyces cerevisiae
YGATAAG
CTTATCR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0289.1
0.851
0.800
DAL80
M08564_2.00
Saccharomyces cerevisiae
VNMGATAD
HTATCKNB
Misc
DeBoer et al.(2011)
YKR034W_1355
0.851
0.800
GAT1
M00049_2.00
Saccharomyces cerevisiae
NNNNGATANN
NNTATCNNNN
PBM
Badis et al.(2008)
GAT1_2166
0.842
0.743
GAT1
M01546_2.00
Saccharomyces cerevisiae
NNGATWNN
NNWATCNN
PBM
Zhu et al.(2009)
Gat1
0.842
0.743
GAT1
M07478_2.00
Saccharomyces cerevisiae
NHGATAAG
CTTATCDN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0300.1
0.842
0.743
GAT1
M08560_2.00
Saccharomyces cerevisiae
WKTGATWW
WWATCAMW
Misc
DeBoer et al.(2011)
YFL021W_962
0.842
0.743
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMF14934
GATA
27
61
CANCQTSTTPLWRRDESGSVLCNACGLFLKLHGRP
Links
Other
GATA
family TFs
Other
Sphaerulina musiva
TFs
376 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB009393
Anopheles albimanus
AALB009393
I
0.000
AARA001656
Anopheles arabiensis
AARA001656
I
0.000
AATE021108
Anopheles atroparvus
AATE021108
I
0.000
ACHR007539
Anopheles christyi
ACHR007539
I
0.000
ACOM033756
Anopheles coluzzii
ACOM033756
I
0.000
ACUA025676
Anopheles culicifacies
ACUA025676
I
0.000
ADIR010044
Anopheles dirus
ADIR010044
I
0.000
AEPI006953
Anopheles epiroticus
AEPI006953
I
0.000
AFAF007581
Anopheles farauti
AFAF007581
I
0.000
AFUN009221
Anopheles funestus
AFUN009221
I
0.000
AMAM006284
Anopheles maculatus
AMAM006284
I
0.000
AMEC015151
Anopheles melas
AMEC015151
I
0.000
AMEM001654
Anopheles merus
AMEM001654
I
0.000
AMIN002289
Anopheles minimus
AMIN002289
I
0.000
AQUA006380
Anopheles quadriannulatus
AQUA006380
I
0.000
ASIS019148
Anopheles sinensis
ASIS019148
I
0.000
ASTEI08021
Anopheles stephensi
ASTEI08021
I
0.000
BGIBMGA013198
Bombyx mori
BGIBMGA013198
D
0.000
KGM_08612
Danaus plexippus
KGM_08612
I
0.000
DAPPUDRAFT_43067
Daphnia pulex
DAPPUDRAFT_43067
I
0.000
YQE_05964
Dendroctonus ponderosae
YQE_05964
I
0.000
GI15686
Drosophila mojavensis
FBgn0138435
I
0.000
HMEL014166
Heliconius melpomene
HMEL014166
I
0.000
LCUP013174
Lucilia cuprina
LCUP013174
I
0.000
PHUM322020
Pediculus humanus
PHUM322020
I
0.000
PPAI008545
Phlebotomus papatasi
PPAI008545
I
0.000
SINV23626
Solenopsis invicta
SINV23626
I
0.000