CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Hsal_03088--XP_001121273.1_APIME *(Harpegnathos saltator)* GATA
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00320 (GATA)	IPR000679	Hsal_03088--XP_001121273.1_APIME	T195927_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
pnr M03757_2.00	Drosophila melanogaster	NGATAAGATAASN	NSTTATCTTATCN	SELEX Nitta et al.(2015) pnr_1	0.859	0.900
pnr M03758_2.00	Drosophila melanogaster	NHGATAASV	BSTTATCDN	SELEX Nitta et al.(2015) pnr_2	0.859	0.900
pnr M06204_2.00	Drosophila melanogaster	BWGATAA	TTATCWV	B1H Zhu et al.(2011) pnr_SANGER_5_FBgn0003117	0.859	0.900
pnr M08204_2.00	Drosophila melanogaster	ANHNNBHGATAASSDNNB	VNNHSSTTATCDVNNDNT	ChIP-seq Contrino et al.(2012) Mf28	0.859	0.900
pnr M08418_2.00	Drosophila melanogaster	YATCGATWKBY	RVMWATCGATR	ChIP-chip Mathelier et al.(2014) MA0536.1	0.859	0.900
Gata3 M00166_2.00	Mus musculus	NNNHGATHNN	NNDATCDNNN	PBM Badis et al.(2009) Gata3_1024	0.858	0.843
GATA3 M03063_2.00	Homo sapiens	HGATARVV	BBYTATCD	SELEX Jolma et al.(2013) GATA3_1	0.858	0.843
GATA3 M03064_2.00	Homo sapiens	HGATAAVV	BBTTATCD	SELEX Jolma et al.(2013) GATA3_2	0.858	0.843
GATA2 M04879_2.00	Homo sapiens	VHGATAHSV	BSDTATCDB	SELEX Yin et al.(2017) GATA2_eDBD_HT-SELEX	0.858	0.843
GATA3 M04863_2.00	Homo sapiens	HGATAASRATCW	WGATYSTTATCD	SELEX Yin et al.(2017) GATA3_FL_HT-SELEX_1	0.858	0.843
GATA3 M04864_2.00	Homo sapiens	HGATAASATCD	HGATSTTATCD	SELEX Yin et al.(2017) GATA3_FL_HT-SELEX_2	0.858	0.843
Gata3 M05867_2.00	Mus musculus	GATAAN	NTTATC	SMiLE-seq Isakova et al.(2017) GATA3	0.858	0.843
GATA2 M08125_2.00	Homo sapiens	NNAGATAAGNN	NNCTTATCTNN	ChIP-seq Mathelier et al.(2014) MA0036.3	0.858	0.843
GATA2 M07966_2.00	Homo sapiens	NVWGATAAVVN	NBBTTATCWBN	ChIP-seq Gerstein et al.(2012) HUVEC_GATA2_UCD	0.858	0.843
GATA2 M07967_2.00	Homo sapiens	BKNNNNNNNSWGATAASV	BSTTATCWSNNNNNNNMV	ChIP-seq Gerstein et al.(2012) K562b_GATA2_UCD	0.858	0.843
GATA2 M07968_2.00	Homo sapiens	NNKNNNNNNNVWGATAAV	BTTATCWBNNNNNNNMNN	ChIP-seq Gerstein et al.(2012) K562_GATA2_HudsonAlpha	0.858	0.843
GATA2 M07969_2.00	Homo sapiens	NVWGATAAVV	BBTTATCWBN	ChIP-seq Gerstein et al.(2012) K562_GATA2_UChicago	0.858	0.843
GATA2 M07970_2.00	Homo sapiens	VWGATARVVN	NBBYTATCWB	ChIP-seq Gerstein et al.(2012) SH-SY5Y_GATA2_UCD	0.858	0.843
GATA3 M07965_2.00	Homo sapiens	NWGATWRNVATCWSN	NSWGATBNYWATCWN	ChIP-seq Gerstein et al.(2012) T-47D_GATA3_HudsonAlpha	0.858	0.843
GATA2 M09119_2.00	Homo sapiens	NKKNNNNNNDVAGATAASV	BSTTATCTBHNNNNNNMMN	Misc Kulakovskiy et al.(2013) GATA2_HUMAN.H11MO.0.A	0.858	0.843
GATA3 M09116_2.00	Homo sapiens	DVAGATAAVRD	HYBTTATCTBH	Misc Kulakovskiy et al.(2013) GATA3_HUMAN.H11MO.0.A	0.858	0.843
Gata2 M09121_2.00	Mus musculus	DVAGATAASVN	NBSTTATCTBH	Misc Kulakovskiy et al.(2013) GATA2_MOUSE.H11MO.0.A	0.858	0.843
Gata3 M09122_2.00	Mus musculus	NVWGATAAVVDBH	DVHBBTTATCWBN	Misc Kulakovskiy et al.(2013) GATA3_MOUSE.H11MO.0.A	0.858	0.843
GATA2 M09550_2.00	Homo sapiens	VWGATAAGVN	NBCTTATCWB	Misc Heinz et al.(2010) K562-GATA2_GSE18829	0.858	0.843
Gata3 M09551_2.00	Mus musculus	AGATBNNNAGATARV	BYTATCTNNNVATCT	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_1	0.858	0.843
Gata3 M09552_2.00	Mus musculus	AGATBDNNNNDSWGATWRNN	NNYWATCWSHNNNNHVATCT	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_2	0.858	0.843
Gata3 M09553_2.00	Mus musculus	NNNNNNWGATNDNATCWNNN	NNNWGATNHNATCWNNNNNN	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_3	0.858	0.843
Gata3 M09554_2.00	Mus musculus	NWGATNNNNATCWNN	NNWGATNNNNATCWN	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_4	0.858	0.843
Gata3 M09555_2.00	Mus musculus	WGATAAVV	BBTTATCW	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_5	0.858	0.843
GATA2 M10594_2.00	Homo sapiens	BVNGATRNBN	NVNYATCNBV	Transfac Matys et al.(2006) V$GATA2_01	0.858	0.843
GATA2 M10595_2.00	Homo sapiens	NNWGATAASR	YSTTATCWNN	Transfac Matys et al.(2006) V$GATA2_02	0.858	0.843
GATA2 M10596_2.00	Homo sapiens	HSAGATAWBA	TVWTATCWSD	Transfac Matys et al.(2006) V$GATA2_03	0.858	0.843
GATA2 M10597_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA2_Q5	0.858	0.843
GATA3 M10586_2.00	Homo sapiens	NNGATDRNR	YNYHATCNN	Transfac Matys et al.(2006) V$GATA3_01	0.858	0.843
GATA3 M10587_2.00	Homo sapiens	NRWGATAANA	TNTTATCWYN	Transfac Matys et al.(2006) V$GATA3_02	0.858	0.843
GATA3 M10588_2.00	Homo sapiens	ANWGATMWDA	THWKATCWNT	Transfac Matys et al.(2006) V$GATA3_03	0.858	0.843
GATA3 M10589_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA3_Q4	0.858	0.843
GATA2 M04880_2.00	Homo sapiens	NHGATADSV	BSHTATCDN	SELEX Yin et al.(2017) GATA2_eDBD_Methyl-HT-SELEX	0.858	0.843
GATA3 M04865_2.00	Homo sapiens	WGATAASGATCW	WGATCSTTATCW	SELEX Yin et al.(2017) GATA3_FL_Methyl-HT-SELEX_1	0.858	0.843
GATA3 M04866_2.00	Homo sapiens	WGATAASATCW	WGATSTTATCW	SELEX Yin et al.(2017) GATA3_FL_Methyl-HT-SELEX_2	0.858	0.843
GATA1 M02738_2.00	Homo sapiens	GATWASMH	DKSTWATC	SELEX Jolma et al.(2010) GATA1_dimer	0.858	0.800
GATA1 M02739_2.00	Homo sapiens	HGATAA	TTATCD	SELEX Jolma et al.(2010) GATA1_monomer	0.858	0.800
GATA1 M04861_2.00	Homo sapiens	GATAAKDNHMTTATC	GATAAKDNHMTTATC	SELEX Yin et al.(2017) GATA1_eDBD_HT-SELEX	0.858	0.800
GATA1 M07963_2.00	Homo sapiens	NSWGATAASVN	NBSTTATCWSN	ChIP-seq Gerstein et al.(2012) K562b_GATA1_UCD	0.858	0.800
GATA1 M07964_2.00	Homo sapiens	NNKNNNNNNNSWGATAAV	BTTATCWSNNNNNNNMNN	ChIP-seq Gerstein et al.(2012) PBDE_GATA1_UCD	0.858	0.800
GATA1 M08202_2.00	Homo sapiens	NBKBNNNNNNSWGATAASVN	NBSTTATCWSNNNNNNVMVN	ChIP-seq Contrino et al.(2012) Mv73	0.858	0.800
GATA1 M08203_2.00	Homo sapiens	WGATNNNATC	GATNNNATCW	ChIP-seq Contrino et al.(2012) Mv75	0.858	0.800
GATA1 M09115_2.00	Homo sapiens	NBKBNNNNNNVWGATAAVV	BBTTATCWBNNNNNNVMVN	Misc Kulakovskiy et al.(2013) GATA1_HUMAN.H11MO.0.A	0.858	0.800
GATA1 M09549_2.00	Homo sapiens	SWGATAAGVV	BBCTTATCWS	Misc Heinz et al.(2010) K562-GATA1_GSE18829	0.858	0.800
GATA1 M10577_2.00	Homo sapiens	SVNGATDBBN	NVVHATCNBS	Transfac Matys et al.(2006) V$GATA1_01	0.858	0.800
GATA1 M10578_2.00	Homo sapiens	NHVNHGATAVKVBN	NVBMBTATCDNBDN	Transfac Matys et al.(2006) V$GATA1_02	0.858	0.800
GATA1 M10579_2.00	Homo sapiens	RNSNDGATTRBNRN	NYNVYAATCHNSNY	Transfac Matys et al.(2006) V$GATA1_03	0.858	0.800
GATA1 M10580_2.00	Homo sapiens	DNVWGATARVNVN	NBNBYTATCWBNH	Transfac Matys et al.(2006) V$GATA1_04	0.858	0.800
GATA1 M10581_2.00	Homo sapiens	VMHGATAAVM	KBTTATCDKB	Transfac Matys et al.(2006) V$GATA1_05	0.858	0.800
GATA1 M10582_2.00	Homo sapiens	MNAGATAAVR	YBTTATCTNK	Transfac Matys et al.(2006) V$GATA1_06	0.858	0.800
GATA1 M10583_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA1_10	0.858	0.800
GATA1 M10584_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA1_Q6	0.858	0.800
GATA1 M04862_2.00	Homo sapiens	GATAABNNNVTTATC	GATAABNNNVTTATC	SELEX Yin et al.(2017) GATA1_eDBD_Methyl-HT-SELEX	0.858	0.800
srp M03759_2.00	Drosophila melanogaster	NHGATAAVV	BBTTATCDN	SELEX Nitta et al.(2015) srp_1	0.854	0.886
srp M03760_2.00	Drosophila melanogaster	NHGATAABV	BVTTATCDN	SELEX Nitta et al.(2015) srp_2	0.854	0.886
srp M06205_2.00	Drosophila melanogaster	VTCWABCSATAV	BTAWSGVTWGAB	B1H Zhu et al.(2011) srp_FlyReg_FBgn0003507	0.854	0.886
srp M06206_2.00	Drosophila melanogaster	WGATAAGV	BCTTATCW	B1H Zhu et al.(2011) srp_SANGER_5_FBgn0003507	0.854	0.886
srp M09670_2.00	Drosophila melanogaster	KHGATARBV	BVYTATCDM	Misc Kulakovskiy et al.(2009) srp	0.854	0.886
Gata4 M00799_2.00	Mus musculus	NHGATWDNN	NNHWATCDN	PBM Weirauch et al.(2013) pTH1049	0.852	0.857
GATA4 M03066_2.00	Homo sapiens	HGATAAVV	BBTTATCD	SELEX Jolma et al.(2013) GATA4_1	0.852	0.857
GATA5 M03065_2.00	Homo sapiens	HGATAAVV	BBTTATCD	SELEX Jolma et al.(2013) GATA5_1	0.852	0.857
GATA4 M04875_2.00	Homo sapiens	NHGATAASVN	NBSTTATCDN	SELEX Yin et al.(2017) GATA4_eDBD_HT-SELEX	0.852	0.857
GATA5 M04867_2.00	Homo sapiens	NHGATAASVN	NBSTTATCDN	SELEX Yin et al.(2017) GATA5_eDBD_HT-SELEX_1	0.852	0.857
GATA5 M04868_2.00	Homo sapiens	HGATAASRATCD	HGATYSTTATCD	SELEX Yin et al.(2017) GATA5_eDBD_HT-SELEX_2	0.852	0.857
GATA5 M04871_2.00	Homo sapiens	NWGATAASVN	NBSTTATCWN	SELEX Yin et al.(2017) GATA5_FL_HT-SELEX_1	0.852	0.857
GATA5 M04872_2.00	Homo sapiens	WGATAASRATCD	HGATYSTTATCW	SELEX Yin et al.(2017) GATA5_FL_HT-SELEX_2	0.852	0.857
Gata4 M08126_2.00	Mus musculus	NDVAGATAAGR	YCTTATCTBHN	ChIP-seq Mathelier et al.(2014) MA0482.1	0.852	0.857
GATA4 M09117_2.00	Homo sapiens	NVWGATAAGR	YCTTATCWBN	Misc Kulakovskiy et al.(2013) GATA4_HUMAN.H11MO.0.A	0.852	0.857
Gata4 M09123_2.00	Mus musculus	NVWGATAAGR	YCTTATCWBN	Misc Kulakovskiy et al.(2013) GATA4_MOUSE.H11MO.0.A	0.852	0.857
Gata4 M09556_2.00	Mus musculus	NNWGATAASV	BSTTATCWNN	Misc Heinz et al.(2010) Heart-Gata4_GSE35151	0.852	0.857
GATA4 M10590_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA4_Q3	0.852	0.857
GATA4 M10591_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA4_Q5_01	0.852	0.857
GATA4 M04876_2.00	Homo sapiens	NWGATAASVN	NBSTTATCWN	SELEX Yin et al.(2017) GATA4_eDBD_Methyl-HT-SELEX	0.852	0.857
GATA5 M04869_2.00	Homo sapiens	NWGATAASVN	NBSTTATCWN	SELEX Yin et al.(2017) GATA5_eDBD_Methyl-HT-SELEX_1	0.852	0.857
GATA5 M04870_2.00	Homo sapiens	WGATAAVRATCT	AGATYBTTATCW	SELEX Yin et al.(2017) GATA5_eDBD_Methyl-HT-SELEX_2	0.852	0.857
GATA5 M04873_2.00	Homo sapiens	NWGATAASRN	NYSTTATCWN	SELEX Yin et al.(2017) GATA5_FL_Methyl-HT-SELEX_1	0.852	0.857
GATA5 M04874_2.00	Homo sapiens	WGATAANRATCW	WGATYNTTATCW	SELEX Yin et al.(2017) GATA5_FL_Methyl-HT-SELEX_2	0.852	0.857
grn M03754_2.00	Drosophila melanogaster	HGATAASV	BSTTATCD	SELEX Nitta et al.(2015) grn_1	0.851	0.857
grn M03755_2.00	Drosophila melanogaster	NHGATAAGNNNCTTATCDN	NHGATAAGNNNCTTATCDN	SELEX Nitta et al.(2015) grn_2	0.851	0.857
grn M03756_2.00	Drosophila melanogaster	NHGATAACNNNGTTATCDN	NHGATAACNNNGTTATCDN	SELEX Nitta et al.(2015) grn_3	0.851	0.857
Gata1 M08127_2.00	Mus musculus	RNAGATAAGRV	BYCTTATCTNY	ChIP-seq Mathelier et al.(2014) MA0035.3	0.851	0.814
Gata1 M09124_2.00	Mus musculus	BKBNNNNNNVWGATAAVVV	BBBTTATCWBNNNNNNVMV	Misc Kulakovskiy et al.(2013) GATA1_MOUSE.H11MO.0.A	0.851	0.814
Gata5 M00167_2.00	Mus musculus	NNHGAWWNN	NNWWTCDNN	PBM Badis et al.(2009) Gata5_3768	0.850	0.857
Gata5 M10598_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA5_Q4	0.850	0.857
Gata6 M00165_2.00	Mus musculus	NHGATARN	NYTATCDN	PBM Badis et al.(2009) Gata6_3769	0.845	0.814
GATA6 M04877_2.00	Homo sapiens	HGATAABVATCD	HGATBVTTATCD	SELEX Yin et al.(2017) GATA6_eDBD_HT-SELEX	0.845	0.814
GATA6 M08124_2.00	Homo sapiens	NNNAGATAAGRNN	NNYCTTATCTNNN	ChIP-seq Mathelier et al.(2014) MA1104.1	0.845	0.814
GATA6 M09118_2.00	Homo sapiens	NVWGATAAGRNNN	NNNYCTTATCWBN	Misc Kulakovskiy et al.(2013) GATA6_HUMAN.H11MO.0.A	0.845	0.814
Gata6 M09120_2.00	Mus musculus	NVWGATAAGV	BCTTATCWBN	Misc Kulakovskiy et al.(2013) GATA6_MOUSE.H11MO.0.A	0.845	0.814
GATA6 M10592_2.00	Homo sapiens	NNHGATWDNN	NNHWATCDNN	Transfac Matys et al.(2006) V$GATA6_01	0.845	0.814
GATA6 M10593_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA6_Q5	0.845	0.814
GATA6 M04878_2.00	Homo sapiens	HGATAABRATCW	WGATYVTTATCD	SELEX Yin et al.(2017) GATA6_eDBD_Methyl-HT-SELEX	0.845	0.814
elt-1 M08206_2.00	Caenorhabditis elegans	GATWDNVATCT	AGATBNHWATC	ChIP-seq Contrino et al.(2012) Mw144	0.834	0.714
elt-1 M08207_2.00	Caenorhabditis elegans	TGATAASR	YSTTATCA	ChIP-seq Contrino et al.(2012) Mw145	0.834	0.714
For this family, TFs with SR scores > 0.802* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Hsal_03088--XP_001121273.1_APIME	GATA	567	601	CVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMN
Hsal_03088--XP_001121273.1_APIME	GATA	621	655	CSNCETTMTSLWRRNTMGEPVCNACGLYYKLHGVN

Links
Other GATA family TFs
Other *Harpegnathos saltator* TFs

569 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AGOS_AGR117C	Ashbya gossypii	AGOS_AGR117C	I
CAGL0L11880g	Candida glabrata	CAGL0L11880g	I
Ecym_3520	Eremothecium cymbalariae	Ecym_3520	I
KAFR_0A02380	Kazachstania africana	KAFR_0A02380	I
KAFR_0B02550	Kazachstania africana	KAFR_0B02550	I
KNAG_0G01870	Kazachstania naganishii	KNAG_0G01870	I
KNAG_0H03010	Kazachstania naganishii	KNAG_0H03010	I
KLLA0_C17710g	Kluyveromyces lactis	KLLA0_C17710g	I
KLTH0G14454g	Kluyveromyces thermotolerans	KLTH0G14454g	I
Kwal_23453	Kluyveromyces waltii	Kwal_23453	I
LALA0_S07e07030g	Lachancea lanzarotensis	LALA0_S07e07030g	I
KLTH0G14454g	Lachancea thermotolerans	KLTH0G14454g	I
NCAS_0B04840	Naumovozyma castellii	NCAS_0B04840	I
NDAI_0B02250	Naumovozyma dairenensis	NDAI_0B02250	I
SU7_0636	Saccharomyces arboricola	SU7_0636	I
SU7_0955	Saccharomyces arboricola	SU7_0955	I
7085_YER169W	Saccharomyces bayanus	7085_YER169W	I
4347_Multiple	Saccharomyces bayanus	4347_Multiple	I
Scas_Contig681.19	Saccharomyces castellii	Scas_Contig681.19	I
RPH1	Saccharomyces cerevisiae	YER169W	D
GIS1	Saccharomyces cerevisiae	YDR096W	D
SKUD_141701	Saccharomyces kudriavzevii	SKUD_141701	I
3770_YDR096W	Saccharomyces mikatae	3770_YDR096W	I
6173_YER169W	Saccharomyces mikatae	6173_YER169W	I
4088_Multiple	Saccharomyces paradoxus	4088_Multiple	I
6757_YER169W	Saccharomyces paradoxus	6757_YER169W	I
AACERI_AaceriAGR117C	Saccharomycetaceae sp ashbya aceri	AACERI_AaceriAGR117C	I
TBLA_0F03830	Tetrapisispora blattae	TBLA_0F03830	I
TBLA_0E04220	Tetrapisispora blattae	TBLA_0E04220	I
TPHA_0A01940	Tetrapisispora phaffii	TPHA_0A01940	I
TDEL_0A01300	Torulaspora delbrueckii	TDEL_0A01300	I
Kpol_1032p52	Vanderwaltozyma polyspora	Kpol_1032p52	I
ZBAI_04846	Zygosaccharomyces bailii	ZBAI_04846	I
ZBAI_06407	Zygosaccharomyces bailii	ZBAI_06407	I
ZYRO0B11770g	Zygosaccharomyces rouxii	ZYRO0B11770g	I

Hsal_03088--XP_001121273.1_APIME (Harpegnathos saltator) GATA

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

569 Related TFs

Hsal_03088--XP_001121273.1_APIME **(Harpegnathos saltator)
GATA**