29596.m000720 (Ricinus communis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 29596.m000720 T195989_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29596.m000720 GATA 210 247

Links

Other GATA family TFs
Other Ricinus communis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.815
PK04210.1 Cannabis sativa PK04210.1 N 0.867
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.862
Ca_14968 Cicer arietinum Ca_14968 N 0.862
Cla022486 Citrullus lanatus Cla022486 N 0.831
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.836
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.836
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.831
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.867
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.867
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.867
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.862
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.862
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.848
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.836
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.836
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.836
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.867
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.839
MDP0000303048 Malus domestica MDP0000303048 N 0.862
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.861
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.862
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.867
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.862
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.862
Pm004390 Prunus mume Pm004390 N 0.862
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.862
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.862
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.862
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.815
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.810
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.810
TCM_034530 Theobroma cacao TCM_034530 N 0.836
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.856
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.815