CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10002056m.g
(
Citrus clementina
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Ciclev10002056m.g
T196475_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10002056m
GATA
201
238
CTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANKGAL
Ciclev10002060m
GATA
201
238
CTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANKGAL
Ciclev10002131m
GATA
201
238
CTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANKGAL
Ciclev10002330m
GATA
201
237
CTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANKVG
Links
Other
GATA
family TFs
Other
Citrus clementina
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_088930
Aspergillus clavatus
CADACLAG00008857
N
e_gw1.34.5.1
Cochliobolus heterostrophus C5
e_gw1.34.5.1
N
MPH_11049
Macrophomina phaseolina
MPH_11049
N
PEX1_051210
Penicillium expansum
PEX1_051210
N
U727_00433130301
Penicillium solitum
U727_00433130301
N
SEPMUDRAFT_146414
Sphaerulina musiva
SEPMUDRAFT_146414
N