LjT45A20.70.nd (Lotus japonicus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 LjT45A20.70.nd T197118_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjT45A20.70.nd GATA 194 227

Links

Other GATA family TFs
Other Lotus japonicus TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.814
PK04210.1 Cannabis sativa PK04210.1 N 0.839
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.834
Ca_14968 Cicer arietinum Ca_14968 N 0.834
Cla022486 Citrullus lanatus Cla022486 N 0.804
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.834
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.834
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.804
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.839
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.839
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.839
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.834
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.834
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.820
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.834
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.834
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.834
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.839
MDP0000303048 Malus domestica MDP0000303048 N 0.834
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.834
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.834
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.839
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.834
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.834
Pm004390 Prunus mume Pm004390 N 0.834
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.834
29596.m000720 Ricinus communis 29596.m000720 N 0.839
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.834
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.834
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.814
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.809
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.809
TCM_034530 Theobroma cacao TCM_034530 N 0.834
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.828
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.814