TFCP2 (Ochotona princeps)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSOPRG00000005747 T199153_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.972 0.972
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.834 0.834
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.834 0.834
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.834 0.834
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.796 0.796
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.796 0.796
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.796 0.796
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.791 0.791
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.791 0.791
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.791 0.791
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.791 0.791
TFCP2
M03074_2.00 		Homo sapiens
DAWCCGGTTY
RAACCGGWTH		 SELEX
Jolma et al.(2013)
TFCP2_1 		0.736 0.736
TFCP2
M03075_2.00 		Homo sapiens
WCCGGWWHDAWCYGGW
WCCRGWTHDWWCCGGW		 SELEX
Jolma et al.(2013)
TFCP2_2 		0.736 0.736
TFCP2
M04889_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_HT-SELEX 		0.736 0.736
TFCP2
M04891_2.00 		Homo sapiens
AWCYGGTTHNDACCGGTW
WACCGGTHNDAACCRGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_HT-SELEX 		0.736 0.736
TFCP2
M10610_2.00 		Homo sapiens
CTKGKTHKDGC
GCHMDAMCMAG		 Transfac
Matys et al.(2006)
V$CP2_01 		0.736 0.736
TFCP2
M10611_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_02 		0.736 0.736
TFCP2
M10612_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q4 		0.736 0.736
TFCP2
M10613_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q6 		0.736 0.736
TFCP2
M04890_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_Methyl-HT-SELEX 		0.736 0.736
TFCP2
M04892_2.00 		Homo sapiens
AWCCGGWTNDAWCCGGTT
AACCGGWTHNAACCGGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_Methyl-HT-SELEX 		0.736 0.736
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000005289 Grainyhead 43 260

Links

Other Grainyhead family TFs
Other Ochotona princeps TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000028273-D1 Bos grunniens ENSBTAP00000028273-D1 N
ZNF48 Bos taurus ENSBTAG00000031806 N
ZNF48 Callithrix jacchus ENSCJAG00000002611 I
ZNF48 Canis familiaris ENSCAFG00000029852 N
ZNF48 Cavia porcellus ENSCPOG00000001104 N
ENSCSAG00000006039 Chlorocebus sabaeus ENSCSAG00000006039 N
Zfp553 Dipodomys ordii ENSDORG00000013148 N
ZNF48 Felis catus ENSFCAG00000028864 N
ZNF48 Homo sapiens ENSG00000180035 N
ENSSTOG00000021915 Ictidomys tridecemlineatus ENSSTOG00000021915 N
ZNF48 Loxodonta africana ENSLAFG00000008821 N
ENSP00000417204 Macaca fascicularis ENSP00000417204 N
ENSMPUG00000012333 Mustela putorius furo ENSMPUG00000012333 N
Zfp553 Mus musculus ENSMUSG00000045598 N
Myotis_brandtii_ZNF48_10014474 Myotis brandtii Myotis_brandtii_ZNF48_10014474 N
ENSNLEG00000015834 Nomascus leucogenys ENSNLEG00000015834 N
ZNF48 Oryctolagus cuniculus ENSOCUG00000013651 N
ZNF48 Pan troglodytes ENSPTRG00000007999 N
ENSPANG00000016527 Papio anubis ENSPANG00000016527 N
ENSPPYG00000007271 Pongo abelii ENSPPYG00000007271 N
ZNF48 Procavia capensis ENSPCAG00000009103 N
Znf48 Rattus norvegicus ENSRNOG00000017837 N
ZNF48 Sus scrofa ENSSSCG00000007801 N
ZNF48 Tursiops truncatus ENSTTRG00000017273 N