CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo6g022200
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo6g022200
T199939_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo6g022200.1
GRAS
96
484
LIHLLLTCANHVASGSLQNANAALEQLSLLSSPDGDTMQRVAAYFTEALANRILKSWPGLYKALNATQRKTNNVSEEVHVRRLFFDMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALIQDFNSRPEGPPHLRITGVHHHKEVLDQMAHILTEEAEKLDIPFQFNPVVSSLESLNIDQLGVKTGEALAVSSVLQLHNFLASDEDILRKNGYSLSGDSASSLPLPNSGRISRFLNAMWSLSPKIMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLEAKVPRTCQDRSKVEKMFFGEEIKNIIACEGSERRERHEKLEKWSQRIDLAGFGNVPLSYFAMLQGRRLLQGYGFDGYMIKEESGCAVICWQDRPLYSVSAWR
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI2G07297
Brachypodium distachyon
BRADI2G07297
N
evm.TU.supercontig_3.39
Carica papaya
evm.TU.supercontig_3.39
N
MLOC_67613
Hordeum vulgare
MLOC_67613
N
GSMUA_Achr8G19830_001
Musa acuminata
GSMUA_Achr8G19830_001
N
OB01G17890
Oryza brachyantha
OB01G17890
N
BGIOSGA002103
Oryza indica
BGIOSGA002103
N
OS01G0222700
Oryza sativa
OS01G0222700
N
Pavir.Ea00125
Panicum virgatum
Pavir.Ea00125
N
Pavir.Eb00173
Panicum virgatum
Pavir.Eb00173
N
Solyc03g007510.2
Solanum lycopersicum
Solyc03g007510.2
N
PGSC0003DMG400009096
Solanum tuberosum
PGSC0003DMG400009096
N
Sb03g001335
Sorghum bicolor
Sb03g001335
N
Traes_3DS_5523A155D
Triticum aestivum
Traes_3DS_5523A155D
N
TRIUR3_07707
Triticum urartu
TRIUR3_07707
N