CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA03G23070
(
Oryza nivara
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ONIVA03G23070
T200838_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G23070.1
GRAS
133
520
AEQLLNPCAVAVEAGNLSRVQHLFYVLGELESFSGDANHRLAAHGLRALARWLPAAVGPAAAAAVRVPPCSERPTPAFAAAEPRLFRASLIRFHEVSPWFALPNALANAAIAQASTCGAAGATPRPLHVVDLGVSHGVQWPTLLESLTRQPGGRALPSVRLTVVGPGATATSPAAPFSASPPGYDFSPHLLRYAKSINLDLRISRASTLDDAVPGDDGEALVVCLQFRLGHAAAEERREVLRKARGLNPELVVLSELDSGVGVVGGDGGIAAGEFAARLELLWRFLESTSAAFKGKDVEERRLLEAEAGAILAAADVAAAGEGREGWRERMAAAGFEEAPFGAEAVESARSLLRKYDSGWEMSAPSPAAAAVALRWKGQPVSFCSLWR
Links
Other
GRAS
family TFs
Other
Oryza nivara
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_104540.1
Arabidopsis lyrata
scaffold_104540.1
I
AT1G49010
Arabidopsis thaliana
AT1G49010
D
Bostr.26675s0270
Boechera stricta
Bostr.26675s0270
I
Bo6g018000
Brassica oleracea
Bo6g018000
I
Bra018772
Brassica rapa
Bra018772
I
Cagra.1613s0002
Capsella grandiflora
Cagra.1613s0002
I
Carubv10009808m.g
Capsella rubella
Carubv10009808m.g
I
Ca_06612
Cicer arietinum
Ca_06612
I
Cla019277
Citrullus lanatus
Cla019277
I
Ciclev10021342m.g
Citrus clementina
Ciclev10021342m.g
I
Cucsa.198920
Cucumis sativus
Cucsa.198920
I
Eucgr.K02659
Eucalyptus grandis
Eucgr.K02659
I
Thhalv10011650m.g
Eutrema salsugineum
Thhalv10011650m.g
I
gene26214-v1.0-hybrid
Fragaria vesca
gene26214-v1.0-hybrid
I
GLYMA17G13010
Glycine max
GLYMA17G13010
I
GLYMA05G07980
Glycine max
GLYMA05G07980
I
Gorai.006G063000
Gossypium raimondii
Gorai.006G063000
I
chr4.LjB15O07.50.nc
Lotus japonicus
chr4.LjB15O07.50.nc
I
MDP0000853568
Malus domestica
MDP0000853568
I
MTR_4g111975
Medicago truncatula
MTR_4g111975
I
POPTR_0012s05720
Populus trichocarpa
POPTR_0012s05720
I
Pm030197
Prunus mume
Pm030197
I
PRUPE_ppa009092mg
Prunus persica
PRUPE_ppa009092mg
I
30174.m008717
Ricinus communis
30174.m008717
I
SapurV1A.0583s0020
Salix purpurea
SapurV1A.0583s0020
I
Solyc03g119740.2
Solanum lycopersicum
Solyc03g119740.2
I
TCM_012262
Theobroma cacao
TCM_012262
I