CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400011742
(
Solanum tuberosum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PGSC0003DMG400011742
T201118_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400030652
GRAS
48
408
LLGLLLQCAEFVAMENLDEAANLLPEIAELSSPFGSSAERVAAYFAESLSARIISSHLRFYSPLNLKSLTLTHSQKLFTALQSYNTISPLIKFSHYTANQAIYQALEGEDHVHVIDLDIMQGLQWPGLFQILSSRSRKLRSIKITGVGSSMELLESTGRRLTEFANSFGLPFEFQPFEGKIGHITDLNQLGVKIGETTVVNWMHHCLYDITGSDLGTFRLLTLLRPKLITLVEQDLSHGGNFLGRFVEALHYYSALFDALGDGLSEESVERHTVEQQLFSSEIRNIVAVGGPKRTGEVPVERWGVEMKRIGFLPVSLSGTPAAQASLLLGMFPRGYTLVDENGCLKLGWKDLSLLTASAWQ
Links
Other
GRAS
family TFs
Other
Solanum tuberosum
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG97913
Fusarium solani
NechaG97913
N
fgenesh1_pm.sca_76_chr13_2_0000002
Nectria haematococca
fgenesh1_pm.sca_76_chr13_2_0000002
N
SEPMUDRAFT_106556
Sphaerulina musiva
SEPMUDRAFT_106556
N
VDBG_02075
Verticillium albo atrum
VDBG_02075
N
VDBG_02075
Verticillium alfalfae
VDBG_02075
N
VDAG_02532
Verticillium dahliae
VDAG_02532
N
VDAG_04837
Verticillium dahliae
VDAG_04837
I