CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava1376.valid.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava1376.valid.m1
T202044_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava1376.valid.m1
GRAS
46
470
LIHLLLACANHVAAGSVENANISLEQISHLASADGDTMQRIAAYFTEALADRILRKGWPGLHRALTFTKKSLVSEELLVQRLFFELFPFLKLAYVITNQAIIEAMEGEKMVHIIDLNSFEPAQWIDLLQTLSARPEGPPHLRITGIHEQKEVLDQMALRLTEEAEKLDIPFQFNPIVSKLEDLDIESLRVKTGEALAVSSVLQLHSLLAVDDEILKGNSPSASKNPNPSHFQRALQINKNKRTLGELLEKDLVHVYGASPDSALSPLSLAPSPKMGSFLSALWGLSPKLMVITEQESNHNGFTLMERVTEALNFYAALFDCLESTVSRASVERQKVEKMLFGEEIKNIIACEGTDRKERHEKLEKWILRLELAGFGRVPLSYHGILQASRLLQSYGYDGYKIKEENGCLVICWHSRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000005064
Ailuropoda melanoleuca
ENSAMEG00000005064
N
ENSP00000305533-D1
Bos grunniens
ENSP00000305533-D1
N
THAP9
Bos taurus
ENSBTAG00000022450
N
THAP9
Callithrix jacchus
ENSCJAG00000005095
N
THAP9
Canis familiaris
ENSCAFG00000009050
N
THAP9
Choloepus hoffmanni
ENSCHOG00000004005
N
THAP9
Dasypus novemcinctus
ENSDNOG00000043565
N
ENSECAG00000016694
Equus caballus
ENSECAG00000016694
N
THAP9
Felis catus
ENSFCAG00000022064
N
THAP9
Gorilla gorilla
ENSGGOG00000011634
N
THAP9
Homo sapiens
ENSG00000168152
N
ENSSTOG00000012475
Ictidomys tridecemlineatus
ENSSTOG00000012475
N
THAP9
Loxodonta africana
ENSLAFG00000016726
N
ENSP00000305533
Macaca fascicularis
ENSP00000305533
N
THAP9
Macaca mulatta
ENSMMUG00000008510
N
THAP9
Myotis lucifugus
ENSMLUG00000002988
N
ENSNLEG00000008931
Nomascus leucogenys
ENSNLEG00000008931
N
THAP9
Ochotona princeps
ENSOPRG00000012584
N
Ogr14301
Ophisaurus gracilis
Ogr14301
N
THAP9
Oryctolagus cuniculus
ENSOCUG00000000333
N
ENSOARG00000001821
Ovis aries
ENSOARG00000001821
N
THAP9
Pan troglodytes
ENSPTRG00000016222
N
ENSPANG00000014746
Papio anubis
ENSPANG00000014746
N
THAP9
Pteropus vampyrus
ENSPVAG00000016817
N
THAP9
Sorex araneus
ENSSARG00000003861
N
ENSTSYG00000005287
Tarsius syrichta
ENSTSYG00000005287
N
THAP9
Tupaia belangeri
ENSTBEG00000017385
N
THAP9
Tursiops truncatus
ENSTTRG00000007672
N
THAP9
Vicugna pacos
ENSVPAG00000011351
N