Cucsa.055340 (Cucumis sativus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cucsa.055340 T202121_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.055340.1 GRAS 46 468

Links

Other GRAS family TFs
Other Cucumis sativus TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.725
SCL3 Arabidopsis thaliana AT1G50420 N 0.729
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.726
Bo3g179450 Brassica oleracea Bo3g179450 N 0.728
Bo6g022200 Brassica oleracea Bo6g022200 N 0.707
Bra014251 Brassica rapa Bra014251 N 0.729
Bra018848 Brassica rapa Bra018848 N 0.722
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.733
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.730
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.706
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.782
Ca_27441 Cicer arietinum Ca_27441 N 0.756
Ca_11133 Cicer arietinum Ca_11133 N 0.768
Cla006433 Citrullus lanatus Cla006433 N 0.943
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.782
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.711
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.785
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.718
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.722
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.736
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.747
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.752
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.710
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.736
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.786
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.736
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.723
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.726
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.760
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.766
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.749
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.748
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.714
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.714
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.742
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.753
mgf008315m Mimulus guttatus mgf008315m N 0.703
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.778
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.700
Pm012190 Prunus mume Pm012190 N 0.790
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.787
30024.m001746 Ricinus communis 30024.m001746 N 0.756
30131.m007244 Ricinus communis 30131.m007244 N 0.708
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.700
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.773
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.703
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.759
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.722
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.730
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.764
TCM_042392 Theobroma cacao TCM_042392 N 0.706
TCM_040833 Theobroma cacao TCM_040833 N 0.784
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.755
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.714