CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1671s0373
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.1671s0373
T202322_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1671s0373.1.p
GRAS
378
749
LRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYMLVCPFKKAAIIFANHSMMRFTENANTIHIIDFGISYGFQWPALIHRLSLRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQKWETIKVEDLKLRQGEYVVVNSLFRFKNLLDETVLVNSPRDAVLKLIRKVNPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLARENEMRLMFEKEFYGREIINVVACEGTERVERPETYKQWQARMVRAGFRQLPLDKELMQNLKLKIDNGYDKNFDVDQNSNWLLQGWKGRIVYASSVWV
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M378DRAFT_106698
Amanita muscaria
M378DRAFT_106698
N
M378DRAFT_643562
Amanita muscaria
M378DRAFT_643562
N
BOTBODRAFT_56780
Botryobasidium botryosum
BOTBODRAFT_56780
N
CC1G_11894
Coprinopsis cinerea
CC1G_11894
N
GALMADRAFT_129242
Galerina marginata
GALMADRAFT_129242
N
GYMLUDRAFT_174952
Gymnopus luxurians
GYMLUDRAFT_174952
N
GYMLUDRAFT_178110
Gymnopus luxurians
GYMLUDRAFT_178110
N
M413DRAFT_446130
Hebeloma cylindrosporum
M413DRAFT_446130
N
K443DRAFT_683335
Laccaria amethystina
K443DRAFT_683335
N
LACBIDRAFT_296675
Laccaria bicolor
LACBIDRAFT_296675
N
Moror_1203
Moniliophthora roreri
Moror_1203
N
PLEOSDRAFT_1012254
Pleurotus ostreatus
PLEOSDRAFT_1012254
N