CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10019773.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10019773.g
T202735_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10019773
GRAS
50
473
LIQLLRTCANHVASGSIENANISLGHISNLASPNGDTMQRIAAYFTEALADRIMLKTWPGLHKALNSTRTTCSSAASEEMLVQKLFFELCPFLKLSYVITNQAIVEAMEGEKMIHIVDLNSFEPAQWIELLRTLSARPEGPPHLRITGIHEHKEVLDRMGARLVEEAEKLDIPFQFNSIPGKLENLDLECLRVKTGEALAVSSVLQLHSLLATDEQEVVARGLPSAARNHVQKFMQTNRSQKTLSEWLENDSSPDSALSPLSSSSMAPSPTMGTFLSSLCALSPKIMVITEQESDHNSHSLTERVAEAMNFYAALFDCLESSADHPRALLERQKVEKMLFGKEIKNIIACEGIERKERHEKLEKWILRVELAGFGRVPLSYDGMWQANKLLQSYNYGGYKIKEKQGCLLICWHDRPLYSVSAWR
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK02707.1
Cannabis sativa
PK02707.1
N
0.707
evm.TU.supercontig_197.7
Carica papaya
evm.TU.supercontig_197.7
N
0.755
Ciclev10031389m.g
Citrus clementina
Ciclev10031389m.g
N
0.748
Ciclev10015219m.g
Citrus clementina
Ciclev10015219m.g
N
0.702
orange1.1g011736m.g
Citrus sinensis
orange1.1g011736m.g
N
0.760
Eucgr.G03258
Eucalyptus grandis
Eucgr.G03258
N
0.726
gene14438-v1.0-hybrid
Fragaria vesca
gene14438-v1.0-hybrid
N
0.714
Gorai.006G125700
Gossypium raimondii
Gorai.006G125700
N
0.701
Gorai.012G080500
Gossypium raimondii
Gorai.012G080500
N
0.759
Gorai.013G015100
Gossypium raimondii
Gorai.013G015100
N
0.738
Lus10039562.g
Linum usitatissimum
Lus10039562.g
N
0.837
Lus10024177.g
Linum usitatissimum
Lus10024177.g
N
0.839
cassava1375.valid.m1
Manihot esculenta
cassava1375.valid.m1
N
0.771
cassava1376.valid.m1
Manihot esculenta
cassava1376.valid.m1
N
0.771
cassava20989.m1
Manihot esculenta
cassava20989.m1
N
0.733
POPTR_0003s20100
Populus trichocarpa
POPTR_0003s20100
N
0.766
POPTR_0001s06090
Populus trichocarpa
POPTR_0001s06090
N
0.763
Pm016466
Prunus mume
Pm016466
N
0.729
Pm029840
Prunus mume
Pm029840
N
0.729
PRUPE_ppa005439mg
Prunus persica
PRUPE_ppa005439mg
N
0.729
30131.m007244
Ricinus communis
30131.m007244
N
0.763
SapurV1A.0009s0760
Salix purpurea
SapurV1A.0009s0760
N
0.768
SapurV1A.0504s0280
Salix purpurea
SapurV1A.0504s0280
N
0.741
SapurV1A.1723s0080
Salix purpurea
SapurV1A.1723s0080
N
0.732
TCM_042392
Theobroma cacao
TCM_042392
N
0.763
TCM_040833
Theobroma cacao
TCM_040833
N
0.705
VIT_13s0019g01220
Vitis vinifera
VIT_13s0019g01220
N
0.749