CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003098.6
(
Alligator sinensis
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02946 (GTF2I)
IPR004212
Alligator_sinensis_CCG003098.6
T203554_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003098.6
GTF2I-like
150
224
LKKSVEDFFCFCYGKALGKSTVVPVPYDKIQRDQSAVVVQGLPEGLAFKHPANYDVSTLKWILENKSGISFIIKR
Links
Other
GTF2I-like
family TFs
Other
Alligator sinensis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J25423
Panicum virgatum
Pavir.J25423
N
Pavir.J15543
Panicum virgatum
Pavir.J15543
N
Pavir.J10621
Panicum virgatum
Pavir.J10621
N
Pavir.J08193
Panicum virgatum
Pavir.J08193
N
Pavir.Ib02562
Panicum virgatum
Pavir.Ib02562
N
Pavir.Hb01581
Panicum virgatum
Pavir.Hb01581
N
Pavir.Hb01043
Panicum virgatum
Pavir.Hb01043
N
Pavir.Cb01025
Panicum virgatum
Pavir.Cb01025
N
Pavir.Ba02755
Panicum virgatum
Pavir.Ba02755
N
Pavir.Ba00900
Panicum virgatum
Pavir.Ba00900
N
Pavir.Ab01384
Panicum virgatum
Pavir.Ab01384
N
Sb08g005616
Sorghum bicolor
Sb08g005616
N
Sb10g011520
Sorghum bicolor
Sb10g011520
N
Sb07g014876
Sorghum bicolor
Sb07g014876
N
Sb05g007535
Sorghum bicolor
Sb05g007535
N
Sb05g004780
Sorghum bicolor
Sb05g004780
N
Sb04g017410
Sorghum bicolor
Sb04g017410
N
Sb04g008820
Sorghum bicolor
Sb04g008820
N
Sb02g013136
Sorghum bicolor
Sb02g013136
N
Sb02g011140
Sorghum bicolor
Sb02g011140
N
Sb01g047190
Sorghum bicolor
Sb01g047190
N
Sb01g027440
Sorghum bicolor
Sb01g027440
N
Sb01g024553
Sorghum bicolor
Sb01g024553
N
Sb01g013490
Sorghum bicolor
Sb01g013490
N
GRMZM2G454472
Zea mays
GRMZM2G454472
N