AAEL000414 (Aedes aegypti)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AAEL000414 T203931_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 0.982
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 0.982
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 0.982
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 0.982
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.965
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.965
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.965
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.965
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.965
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.965
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.965
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.965
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.965
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.965
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.965
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.947
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAEL000414-PA Homeodomain 157 213

Links

Other Homeodomain family TFs
Other Aedes aegypti TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I 0.000
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.000
Ca_06925 Cicer arietinum Ca_06925 N 0.000
LjSGA_102038.1 Lotus japonicus LjSGA_102038.1 I 0.000
CM0385.290.nd Lotus japonicus CM0385.290.nd I 0.000
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.000
mgf024704m Mimulus guttatus mgf024704m N 0.000
OBART03G14380 Oryza barthii OBART03G14380 I 0.000
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.000
BGIOSGA003347 Oryza indica BGIOSGA003347 I 0.000
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.000
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.000
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.000
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I 0.000
Pavir.Ea01343 Panicum virgatum Pavir.Ea01343 I 0.000
29816.m000664 Ricinus communis 29816.m000664 N 0.000
29889.m003258 Ricinus communis 29889.m003258 I 0.000
30076.m004682 Ricinus communis 30076.m004682 I 0.000
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N 0.000
SapurV1A.0553s0120 Salix purpurea SapurV1A.0553s0120 N 0.000
SELMODRAFT_39507 Selaginella moellendorffii SELMODRAFT_39507 N 0.000
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I 0.000
SELMODRAFT_39516 Selaginella moellendorffii SELMODRAFT_39516 N 0.000
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I 0.000
Traes_4BL_F7B9CBA99 Triticum aestivum Traes_4BL_F7B9CBA99 N 0.000
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.000
GRMZM2G129872 Zea mays GRMZM2G129872 I 0.000
MYBP_MAIZE Zea mays MYBP_MAIZE D 0.000
GRMZM2G016020 Zea mays GRMZM2G016020 I 0.000