CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CADANGAG00002342
(
Aspergillus niger
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CADANGAG00002342
T205313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN
NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.867
0.965
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR
YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.623
0.474
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR
YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.623
0.474
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.623
0.474
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.623
0.474
NCU03266
M02224_2.00
Neurospora crassa
NNBWWAKDRN
NYHMTWWVNN
PBM
Weirauch et al.(2014)
pTH8814
0.610
0.737
FGRRES_01100
M02131_2.00
Fusarium graminearum
WTTAATTR
YAATTAAW
PBM
Weirauch et al.(2014)
pTH5438
0.609
0.702
YHP1
M02191_2.00
Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN
PBM
Weirauch et al.(2014)
pTH6381
0.601
0.421
YHP1
M08423_2.00
Saccharomyces cerevisiae
TAATTG
CAATTA
ChIP-chip
Mathelier et al.(2014)
MA0426.1
0.601
0.421
YHP1
M08573_2.00
Saccharomyces cerevisiae
WNTAATTR
YAATTANW
Misc
DeBoer et al.(2011)
YDR451C_716
0.601
0.421
YHP1
M10797_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$YHP1_01
0.601
0.421
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANGAP00002278
Homeodomain
54
110
RQKRRRTSPEDHAILEAEYQRNPKPDKTARASIVSRVSLGEKEVQIWFQNRRQNDRR
Links
Other
Homeodomain
family TFs
Other
Aspergillus niger
TFs
176 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000010206
Ailuropoda melanoleuca
ENSAMEG00000010206
N
0.000
ENSAPLG00000013214
Anas platyrhynchos
ENSAPLG00000013214
N
0.000
SALL3
Anolis carolinensis
ENSACAG00000000478
N
0.000
SALL3
Callithrix jacchus
ENSCJAG00000007332
N
0.000
SALL3
Canis familiaris
ENSCAFG00000000013
N
0.000
SALL3
Cavia porcellus
ENSCPOG00000008546
N
0.000
sall3b
Danio rerio
ENSDARG00000057586
N
0.000
sall3a
Danio rerio
ENSDARG00000079613
N
0.000
SALL3
Equus caballus
ENSECAG00000015414
N
0.000
ENSFALG00000013343
Ficedula albicollis
ENSFALG00000013343
N
0.000
ENSGMOG00000006649
Gadus morhua
ENSGMOG00000006649
N
0.000
ENSGALG00000012657
Gallus gallus
ENSGALG00000012657
N
0.000
sall3a
Gasterosteus aculeatus
ENSGACG00000005503
N
0.000
SALL3
Gorilla gorilla
ENSGGOG00000008127
N
0.000
SALL3
Homo sapiens
ENSG00000256463
N
0.000
ENSSTOG00000004145
Ictidomys tridecemlineatus
ENSSTOG00000004145
N
0.000
ENSLOCG00000007831
Lepisosteus oculatus
ENSLOCG00000007831
N
0.000
SALL3
Macaca mulatta
ENSMMUG00000000286
N
0.000
SALL3
Meleagris gallopavo
ENSMGAG00000002297
N
0.000
SALL3
Monodelphis domestica
ENSMODG00000012231
N
0.000
ENSMPUG00000016646
Mustela putorius furo
ENSMPUG00000016646
N
0.000
Sall3
Mus musculus
ENSMUSG00000024565
N
0.000
ENSONIG00000007305
Oreochromis niloticus
ENSONIG00000007305
N
0.000
SALL1
Ornithorhynchus anatinus
ENSOANG00000013399
N
0.000
SALL3
Oryctolagus cuniculus
ENSOCUG00000029398
N
0.000
sall3a
Oryzias latipes
ENSORLG00000020718
N
0.000
ENSOARG00000017583
Ovis aries
ENSOARG00000017583
N
0.000
SALL3
Pan troglodytes
ENSPTRG00000010126
N
0.000
ENSPANG00000006485
Papio anubis
ENSPANG00000006485
N
0.000
ENSPSIG00000008556
Pelodiscus sinensis
ENSPSIG00000008556
N
0.000
ENSPFOG00000019127
Poecilia formosa
ENSPFOG00000019127
N
0.000
ENSPPYG00000009253
Pongo abelii
ENSPPYG00000009253
N
0.000
ENSSHAG00000015872
Sarcophilus harrisii
ENSSHAG00000015872
N
0.000
sall1a
Takifugu rubripes
ENSTRUG00000008950
N
0.000
SALL3
Tursiops truncatus
ENSTTRG00000004958
N
0.000
ENSXMAG00000009081
Xiphophorus maculatus
ENSXMAG00000009081
N
0.000