IRX2 (Cavia porcellus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCPOG00000000858 T208070_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.866 0.982
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.866 0.982
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.866 0.982
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.866 0.982
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.866 0.982
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.866 0.982
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.814 0.912
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.814 0.912
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.814 0.912
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.781 0.895
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000000772 Homeodomain 114 173

Links

Other Homeodomain family TFs
Other Cavia porcellus TFs

379 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004412 Ailuropoda melanoleuca ENSAMEG00000004412 N 0.000
ENSBTAP00000050548-D1 Bos grunniens ENSBTAP00000050548-D1 N 0.000
MYCL Bos taurus ENSBTAG00000006338 N 0.000
ENSCJAG00000002700 Callithrix jacchus ENSCJAG00000002700 N 0.000
MYCL Canis familiaris ENSCAFG00000003022 N 0.000
ENSCPOG00000012827 Cavia porcellus ENSCPOG00000012827 N 0.000
ENSCSAG00000001138 Chlorocebus sabaeus ENSCSAG00000001138 N 0.000
MYCL Dasypus novemcinctus ENSDNOG00000001996 N 0.000
MYCL Equus caballus ENSECAG00000008765 N 0.000
MYCL Erinaceus europaeus ENSEEUG00000004078 N 0.000
MYCL Gorilla gorilla ENSGGOG00000001693 N 0.000
MYCL Homo sapiens ENSG00000116990 N 0.000
ENSSTOG00000005037 Ictidomys tridecemlineatus ENSSTOG00000005037 N 0.000
ENSLAFG00000001935 Loxodonta africana ENSLAFG00000001935 N 0.000
ENSMMUP00000021322 Macaca fascicularis ENSMMUP00000021322 N 0.000
MYCL Macaca mulatta ENSMMUG00000016223 N 0.000
ENSMEUG00000000536 Macropus eugenii ENSMEUG00000000536 N 0.000
ENSMICG00000016303 Microcebus murinus ENSMICG00000016303 N 0.000
MYCL Monodelphis domestica ENSMODG00000017647 N 0.000
ENSMPUG00000014286 Mustela putorius furo ENSMPUG00000014286 N 0.000
Mycl Mus musculus ENSMUSG00000028654 N 0.000
Myotis_brandtii_MYCL1_10028964 Myotis brandtii Myotis_brandtii_MYCL1_10028964 N 0.000
MYCL Myotis lucifugus ENSMLUG00000000337 N 0.000
ENSNLEG00000012063 Nomascus leucogenys ENSNLEG00000012063 N 0.000
MYCL Ochotona princeps ENSOPRG00000003229 N 0.000
MYCL Oryctolagus cuniculus ENSOCUG00000025113 N 0.000
MYCL Otolemur garnettii ENSOGAG00000015380 N 0.000
ENSOARG00000020147 Ovis aries ENSOARG00000020147 N 0.000
MYCL Pan troglodytes ENSPTRG00000000580 N 0.000
ENSPANG00000010238 Papio anubis ENSPANG00000010238 N 0.000
ENSPPYG00000001498 Pongo abelii ENSPPYG00000001498 N 0.000
MYCL Pteropus vampyrus ENSPVAG00000003347 N 0.000
Mycl Rattus norvegicus ENSRNOG00000014259 N 0.000
ENSSHAG00000018449 Sarcophilus harrisii ENSSHAG00000018449 N 0.000
ENSSSCG00000003668 Sus scrofa ENSSSCG00000003668 N 0.000
ENSTSYG00000009275 Tarsius syrichta ENSTSYG00000009275 N 0.000
MYCL Tursiops truncatus ENSTTRG00000005113 N 0.000
mycl Xenopus tropicalis XB-GENE-6453835 N 0.000