IRX2 (Otolemur garnettii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOGAG00000012910 T213314_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000011572 Homeodomain 115 174

Links

Other Homeodomain family TFs
Other Otolemur garnettii TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00289 Aquilegia coerulea Aquca_004_00289 I 0.000
Aquca_009_00736 Aquilegia coerulea Aquca_009_00736 I 0.000
fgenesh2_kg.4__1876__AT2G38090.1 Arabidopsis lyrata fgenesh2_kg.4__1876__AT2G38090.1 I 0.000
AT2G38090 Arabidopsis thaliana AT2G38090 D 0.000
Bostr.23794s0264 Boechera stricta Bostr.23794s0264 I 0.000
Bo3g018460 Brassica oleracea Bo3g018460 I 0.000
Bo3g032160 Brassica oleracea Bo3g032160 I 0.000
Bo4g029810 Brassica oleracea Bo4g029810 I 0.000
Bo4g187390 Brassica oleracea Bo4g187390 I 0.000
Bra000038 Brassica rapa Bra000038 I 0.000
Bra002610 Brassica rapa Bra002610 I 0.000
Bra005139 Brassica rapa Bra005139 I 0.000
Bra006741 Brassica rapa Bra006741 I 0.000
Bra017138 Brassica rapa Bra017138 I 0.000
PK27213.1 Cannabis sativa PK27213.1 D 0.000
PK27693.1 Cannabis sativa PK27693.1 D 0.000
Cagra.0090s0025 Capsella grandiflora Cagra.0090s0025 I 0.000
Cagra.0891s0087 Capsella grandiflora Cagra.0891s0087 I 0.000
Carubv10023736m.g Capsella rubella Carubv10023736m.g I 0.000
Carubv10026903m.g Capsella rubella Carubv10026903m.g I 0.000
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I 0.000
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.000
Ca_12513 Cicer arietinum Ca_12513 I 0.000
Ca_14247 Cicer arietinum Ca_14247 I 0.000
Ca_15603 Cicer arietinum Ca_15603 I 0.000
Ca_19327 Cicer arietinum Ca_19327 I 0.000
Cla004397 Citrullus lanatus Cla004397 I 0.000
Cla013553 Citrullus lanatus Cla013553 I 0.000
Cla018243 Citrullus lanatus Cla018243 I 0.000
Cla018399 Citrullus lanatus Cla018399 I 0.000
Ciclev10012285m.g Citrus clementina Ciclev10012285m.g I 0.000
Ciclev10028910m.g Citrus clementina Ciclev10028910m.g I 0.000
orange1.1g021756m.g Citrus sinensis orange1.1g021756m.g I 0.000
orange1.1g021816m.g Citrus sinensis orange1.1g021816m.g I 0.000
Cucsa.067080 Cucumis sativus Cucsa.067080 I 0.000
Cucsa.139090 Cucumis sativus Cucsa.139090 I 0.000
Cucsa.164580 Cucumis sativus Cucsa.164580 I 0.000
Cucsa.176140 Cucumis sativus Cucsa.176140 I 0.000
Eucgr.B02800 Eucalyptus grandis Eucgr.B02800 I 0.000
Eucgr.J01940 Eucalyptus grandis Eucgr.J01940 I 0.000
Thhalv10014270m.g Eutrema salsugineum Thhalv10014270m.g I 0.000
Thhalv10017008m.g Eutrema salsugineum Thhalv10017008m.g I 0.000
gene07984-v1.0-hybrid Fragaria vesca gene07984-v1.0-hybrid I 0.000
gene18815-v1.0-hybrid Fragaria vesca gene18815-v1.0-hybrid I 0.000
GLYMA01G27720 Glycine max GLYMA01G27720 I 0.000
GLYMA02G39000 Glycine max GLYMA02G39000 I 0.000
GLYMA02G42140 Glycine max GLYMA02G42140 I 0.000
GLYMA03G14440 Glycine max GLYMA03G14440 I 0.000
GLYMA07G17660 Glycine max GLYMA07G17660 I 0.000
GLYMA11G22960 Glycine max GLYMA11G22960 I 0.000
GLYMA11G34930 Glycine max GLYMA11G34930 I 0.000
GLYMA14G06750 Glycine max GLYMA14G06750 I 0.000
GLYMA14G37050 Glycine max GLYMA14G37050 I 0.000
GLYMA18G03430 Glycine max GLYMA18G03430 I 0.000
GLYMA18G07250 Glycine max GLYMA18G07250 I 0.000
GLYMA18G42530 Glycine max GLYMA18G42530 I 0.000
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I 0.000
Gorai.006G180900 Gossypium raimondii Gorai.006G180900 I 0.000
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I 0.000
Gorai.009G093700 Gossypium raimondii Gorai.009G093700 I 0.000
Gorai.012G075600 Gossypium raimondii Gorai.012G075600 I 0.000
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I 0.000
Lus10009884.g Linum usitatissimum Lus10009884.g I 0.000
Lus10018209.g Linum usitatissimum Lus10018209.g I 0.000
Lus10028264.g Linum usitatissimum Lus10028264.g I 0.000
Lus10035518.g Linum usitatissimum Lus10035518.g I 0.000
Lus10040696.g Linum usitatissimum Lus10040696.g I 0.000
MDP0000142580 Malus domestica MDP0000142580 I 0.000
MDP0000221993 Malus domestica MDP0000221993 I 0.000
cassava23290.valid.m1 Manihot esculenta cassava23290.valid.m1 I 0.000
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I 0.000
cassava26873.m1 Manihot esculenta cassava26873.m1 I 0.000
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I 0.000
MTR_3g462790 Medicago truncatula MTR_3g462790 I 0.000
MTR_5g069710 Medicago truncatula MTR_5g069710 I 0.000
MTR_5g081860 Medicago truncatula MTR_5g081860 I 0.000
MTR_7g067080 Medicago truncatula MTR_7g067080 I 0.000
mgf022442m Mimulus guttatus mgf022442m I 0.000
GSMUA_Achr8G02380_001 Musa acuminata GSMUA_Achr8G02380_001 I 0.000
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I 0.000
POPTR_0006s09860 Populus trichocarpa POPTR_0006s09860 I 0.000
POPTR_0009s04730 Populus trichocarpa POPTR_0009s04730 I 0.000
POPTR_0010s20040 Populus trichocarpa POPTR_0010s20040 I 0.000
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I 0.000
Pm000529 Prunus mume Pm000529 I 0.000
Pm002536 Prunus mume Pm002536 I 0.000
PRUPE_ppa009072mg Prunus persica PRUPE_ppa009072mg I 0.000
PRUPE_ppa009103mg Prunus persica PRUPE_ppa009103mg I 0.000
28288.m000014 Ricinus communis 28288.m000014 I 0.000
29610.m000410 Ricinus communis 29610.m000410 I 0.000
29681.m001296 Ricinus communis 29681.m001296 I 0.000
SapurV1A.0001s0790 Salix purpurea SapurV1A.0001s0790 I 0.000
SapurV1A.0041s0720 Salix purpurea SapurV1A.0041s0720 I 0.000
SapurV1A.0164s0380 Salix purpurea SapurV1A.0164s0380 I 0.000
SapurV1A.0262s0080 Salix purpurea SapurV1A.0262s0080 I 0.000
SapurV1A.0709s0190 Salix purpurea SapurV1A.0709s0190 I 0.000
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I 0.000
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I 0.000
Solyc06g076770.2 Solanum lycopersicum Solyc06g076770.2 I 0.000
Solyc09g014250.2 Solanum lycopersicum Solyc09g014250.2 I 0.000
Solyc10g076820.1 Solanum lycopersicum Solyc10g076820.1 I 0.000
PGSC0003DMG400019129 Solanum tuberosum PGSC0003DMG400019129 I 0.000
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I 0.000
PGSC0003DMG400030348 Solanum tuberosum PGSC0003DMG400030348 I 0.000
TCM_021750 Theobroma cacao TCM_021750 I 0.000
TCM_041672 Theobroma cacao TCM_041672 I 0.000
VIT_06s0004g06100 Vitis vinifera VIT_06s0004g06100 I 0.000
VIT_08s0007g01920 Vitis vinifera VIT_08s0007g01920 I 0.000