IRX4 (Otolemur garnettii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOGAG00000030171 T213392_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.867 1.000
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.788 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.788 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.788 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.780 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.780 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.780 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.893
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.893
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.893
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.893
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.893
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000020021 Homeodomain 144 202

Links

Other Homeodomain family TFs
Other Otolemur garnettii TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_19748 Ancylostoma caninum ANCCAN_19748 N 0.000
ANCCAN_17994 Ancylostoma caninum ANCCAN_17994 N 0.000
ANCCAN_02907 Ancylostoma caninum ANCCAN_02907 N 0.000
ENSACAG00000011860 Anolis carolinensis ENSACAG00000011860 N 0.000
AALB000417 Anopheles albimanus AALB000417 N 0.000
AATE002453 Anopheles atroparvus AATE002453 N 0.000
AATE020165 Anopheles atroparvus AATE020165 N 0.000
ACHR005918 Anopheles christyi ACHR005918 N 0.000
ADAC010198 Anopheles darlingi ADAC010198 N 0.000
ADIR010892 Anopheles dirus ADIR010892 N 0.000
AEPI001845 Anopheles epiroticus AEPI001845 N 0.000
AEPI001841 Anopheles epiroticus AEPI001841 N 0.000
AMEC018160 Anopheles melas AMEC018160 N 0.000
AMEM005938 Anopheles merus AMEM005938 N 0.000
Bm6032 Brugia malayi Bm6032 N 0.000
BTMF_0001483201 Brugia timori BTMF_0001483201 N 0.000
Brh_R005675 Buceros rhinoceros Brh_R005675 N 0.000
CJA37253 Caenorhabditis japonica CJA37253 N 0.000
CRE02357 Caenorhabditis remanei CRE02357 N 0.000
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.000
Cflo_07689--XP_001122560.1_APIME Camponotus floridanus Cflo_07689--XP_001122560.1_APIME N 0.000
CLEC007098 Cimex lectularius CLEC007098 N 0.000
CpipJ_CPIJ000433 Culex pipiens CpipJ_CPIJ000433 N 0.000
CPIJ000433 Culex quinquefasciatus CPIJ000433 N 0.000
ENSECAG00000018160 Equus caballus ENSECAG00000018160 N 0.000
Gfo_R006963 Geospiza fortis Gfo_R006963 N 0.000
HelroG89689 Helobdella robusta HelroG89689 N 0.000
TBR1 Homo sapiens ENSG00000136535 D 0.000
nLs.2.1.2.g03773 Litomosoides sigmodontis nLs.2.1.2.g03773 N 0.000
T Mus musculus ENSMUSG00000062327 D 0.000
Tbr1 Mus musculus ENSMUSG00000035033 D 0.000
NBR_0001696801 Nippostrongylus brasiliensis NBR_0001696801 N 0.000
ENSOANG00000028644 Ornithorhynchus anatinus ENSOANG00000028644 N 0.000
scaffold432-EXSNAP2012.9 Pristionchus exspectatus scaffold432-EXSNAP2012.9 N 0.000
PPA25262 Pristionchus pacificus PPA25262 N 0.000
Sakowv30001714m.g Saccoglossus kowalevskii Sakowv30001714m.g I 0.000
ENSTGUG00000006709 Taeniopygia guttata ENSTGUG00000006709 N 0.000
ENSTRUG00000007811 Takifugu rubripes ENSTRUG00000007811 N 0.000
ENSTSYG00000004047 Tarsius syrichta ENSTSYG00000004047 N 0.000
TCLT_0000808101 Thelazia callipaeda TCLT_0000808101 N 0.000
WUBG_08467 Wuchereria bancrofti WUBG_08467 N 0.000