ENSPMAG00000000895 (Petromyzon marinus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPMAG00000000895 T214583_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Cdx2
M00447_2.00 		Mus musculus
NWWAYDRNN
NNYHRTWWN		 PBM
Berger et al.(2008)
Cdx2_4272 		0.688 0.807
Cdx2
M09193_2.00 		Mus musculus
BTTTATKRCYBY
RVRGYMATAAAV		 Misc
Kulakovskiy et al.(2013)
CDX2_MOUSE.H11MO.0.A 		0.688 0.807
Cdx2
M09572_2.00 		Mus musculus
NTTTTATKRC
GYMATAAAAN		 Misc
Heinz et al.(2010)
mES-Cdx2_GSE14586 		0.688 0.821
CDX1
M10761_2.00 		Gallus gallus
BDBWAAK
MTTWVHV		 Transfac
Matys et al.(2006)
V$CDXA_01 		0.684 0.839
CDX1
M10762_2.00 		Gallus gallus
WWWWMYR
YRKWAWW		 Transfac
Matys et al.(2006)
V$CDXA_02 		0.684 0.825
Cdx1
M00427_2.00 		Mus musculus
NWWATDRNN
NNYHATWWN		 PBM
Berger et al.(2008)
Cdx1_2245 		0.684 0.807
CDX1
M03115_2.00 		Homo sapiens
NTTTATKRB
VYMATAAAN		 SELEX
Jolma et al.(2013)
CDX1_1 		0.684 0.821
CDX2
M03196_2.00 		Homo sapiens
KTTTATKRB
VYMATAAAM		 SELEX
Jolma et al.(2013)
CDX2_1 		0.684 0.821
CDX1
M05018_2.00 		Homo sapiens
VKTTTATKRCN
NGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX1_eDBD_HT-SELEX 		0.684 0.821
CDX2
M05248_2.00 		Homo sapiens
NDTWAYRRYN
NRYYRTWAHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_1 		0.684 0.821
CDX2
M05249_2.00 		Homo sapiens
NDWWATKRB
VYMATWWHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_2 		0.684 0.821
CDX2
M08131_2.00 		Homo sapiens
YTTTATKRCHB
VDGYMATAAAR		 ChIP-seq
Mathelier et al.(2014)
MA0465.1 		0.684 0.821
CDX1
M09140_2.00 		Homo sapiens
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_HUMAN.H11MO.0.C 		0.684 0.807
CDX2
M09152_2.00 		Homo sapiens
DTTBATKGCHNB
VNDGCMATVAAH		 Misc
Kulakovskiy et al.(2013)
CDX2_HUMAN.H11MO.0.A 		0.684 0.807
Cdx1
M09186_2.00 		Mus musculus
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_MOUSE.H11MO.0.C 		0.684 0.807
CDX1
M10670_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q4 		0.684 0.821
CDX1
M10671_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q5 		0.684 0.807
CDX2
M10723_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_01 		0.684 0.807
CDX2
M10724_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_02 		0.684 0.807
CDX2
M10725_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5 		0.684 0.807
CDX2
M10726_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q6 		0.684 0.821
CDX1
M05019_2.00 		Homo sapiens
NGTCGTAAAWB
VWTTTACGACN		 SELEX
Yin et al.(2017)
CDX1_eDBD_Methyl-HT-SELEX 		0.684 0.821
CDX2
M05250_2.00 		Homo sapiens
NRTCGTAWHBNN
NNVDWTACGAYN		 SELEX
Yin et al.(2017)
CDX2_eDBD_Methyl-HT-SELEX 		0.684 0.821
cad
M03780_2.00 		Drosophila melanogaster
NKTTTATKRCHB
VDGYMATAAAMN		 SELEX
Nitta et al.(2015)
cad_1 		0.673 0.714
cad
M03781_2.00 		Drosophila melanogaster
NDTTTATKRCHN
NDGYMATAAAHN		 SELEX
Nitta et al.(2015)
cad_2 		0.673 0.714
cad
M03782_2.00 		Drosophila melanogaster
NDTTTATKRCNB
VNGYMATAAAHN		 SELEX
Nitta et al.(2015)
cad_3 		0.673 0.714
cad
M03783_2.00 		Drosophila melanogaster
NNTTTAYGRYNN
NNRYCRTAAANN		 SELEX
Nitta et al.(2015)
cad_4 		0.673 0.714
cad
M06223_2.00 		Drosophila melanogaster
HTTWATTR
YAATWAAD		 B1H
Zhu et al.(2011)
Cad_Cell_FBgn0000251 		0.673 0.702
cad
M06224_2.00 		Drosophila melanogaster
RBYVDAAMV
BKTTHBRVY		 B1H
Zhu et al.(2011)
cad_FlyReg_FBgn0000251 		0.673 0.714
cad
M06225_2.00 		Drosophila melanogaster
NTTWATKR
YMATWAAN		 B1H
Zhu et al.(2011)
Cad_SOLEXA_FBgn0000251 		0.673 0.702
cad
M08420_2.00 		Drosophila melanogaster
DTTTTATKRYY
RRYMATAAAAH		 ChIP-chip
Mathelier et al.(2014)
MA0216.2 		0.673 0.714
cad
M09580_2.00 		Drosophila melanogaster
DTTTAYGRYN
NRYCRTAAAH		 Misc
Heinz et al.(2010)
Drosophila-Embryos_modEncode 		0.673 0.714
cad
M09674_2.00 		Drosophila melanogaster
HTTTATKRBY
RVYMATAAAD		 Misc
Kulakovskiy et al.(2009)
cad 		0.673 0.714
cad
M10783_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$CAD_Q6 		0.673 0.714
Q70LF3_ARTSF
M02211_2.00 		Artemia franciscana
BTAATTAB
VTAATTAV		 PBM
Weirauch et al.(2014)
pTH5553 		0.663 0.768
Cdx4
M09197_2.00 		Mus musculus
WGATTTATDRBH
DVYHATAAATCW		 Misc
Kulakovskiy et al.(2013)
CDX4_MOUSE.H11MO.0.A 		0.652 0.772
CDX4
M05129_2.00 		Homo sapiens
VKTTTATKRCH
DGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_HT-SELEX 		0.652 0.754
CDX4
M05130_2.00 		Homo sapiens
BGTCGTAAAHN
NDTTTACGACV		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_1 		0.652 0.754
CDX4
M05131_2.00 		Homo sapiens
VKTTTATKGCN
NGCMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_2 		0.652 0.754
pal-1
M02183_2.00 		Caenorhabditis elegans
GYAATWAA
TTWATTRC		 PBM
Weirauch et al.(2014)
pTH6016 		0.643 0.632
Dbx2
M00499_2.00 		Mus musculus
NNDTNNN
NNNAHNN		 PBM
Berger et al.(2008)
Dbx2_3487 		0.643 0.518
Q9GP48_9TURB
M02217_2.00 		Discocelis tigrina
DTAATTAB
VTAATTAH		 PBM
Weirauch et al.(2014)
pTH6515 		0.617 0.667
Dbx1
M00451_2.00 		Mus musculus
WTTAATTA
TAATTAAW		 PBM
Berger et al.(2008)
Dbx1_3486 		0.614 0.491
Dbx
M02128_2.00 		Drosophila melanogaster
WTTAATTA
TAATTAAW		 PBM
Weirauch et al.(2014)
pTH6051 		0.614 0.500
Dbx
M06550_2.00 		Drosophila melanogaster
TTWATKA
TMATWAA		 B1H
Mathelier et al.(2014)
MA0174.1 		0.614 0.500
si:dkey-43p13.5
M02082_2.00 		Danio rerio
DNWNWWNWNH
DNWNWWNWNH		 PBM
Weirauch et al.(2014)
pTH6636 		0.605 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000000983 Homeodomain 10 66
ENSPMAP00000000984 Homeodomain 6 61

Links

Other Homeodomain family TFs
Other Petromyzon marinus TFs

453 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMAG_06979 Allomyces macrogynus AMAG_06979 I
AFUA_3G06170 Aspergillus fumigatus CADAFUAG00005478 I
MAT2 Aspergillus nidulans CADANIAG00005695 I
EURHEDRAFT_401871 Aspergillus ruber EURHEDRAFT_401871 I
BAUCODRAFT_67524 Baudoinia compniacensis BAUCODRAFT_67524 I
BGHDH14_bgh03211 Blumeria graminis BGHDH14_bgh03211 I
A1O1_07971 Capronia coronata A1O1_07971 I
CHGG_03580 Chaetomium globosum CHGG_03580 N
CTHT_0001070 Chaetomium thermophilum CTHT_0001070 N
A1O5_13042 Cladophialophora psammophila A1O5_13042 I
CIMG_00406 Coccidioides immitis CIMG_00406 I
CPC735_058040 Coccidioides posadasii CPC735_058040 I
CFIO01_09392 Colletotrichum fioriniae CFIO01_09392 I
CGGC5_3189 Colletotrichum gloeosporioides CGGC5_3189 I
GLRG_04643 Colletotrichum graminicola GLRG_04643 I
CH063_09403 Colletotrichum higginsianum CH063_09403 I
Cob_13096 Colletotrichum orbiculare Cob_13096 N
CSUB01_02050 Colletotrichum sublineola CSUB01_02050 I
DOTSEDRAFT_192196 Dothistroma septosporum DOTSEDRAFT_192196 I
EPUS_08057 Endocarpon pusillum EPUS_08057 I
UCREL1_2891 Eutypa lata UCREL1_2891 N
A1O9_08621 Exophiala aquamarina A1O9_08621 I
PV06_08316 Exophiala oligosperma PV06_08316 I
PV08_07043 Exophiala spinifera PV08_07043 I
FFUJ_05685 Fusarium fujikuroi FFUJ_05685 I
FGRRES_08893 Fusarium graminearum FGRRES_08893 I
GGTG_04697 Gaeumannomyces graminis GGTG_04697 I
CMQ_5376 Grosmannia clavigera CMQ_5376 I
HCBG_05263 Histoplasma capsulatum HCBG_05263 I
MGG_02978 Magnaporthe oryzae MGG_02978 I
MAC_05350 Metarhizium acridum MAC_05350 I
MAM_01740 Metarhizium album MAM_01740 I
MBR_08193 Metarhizium brunneum MBR_08193 I
MAJ_11317 Metarhizium majus MAJ_11317 I
Ocbimv22024932m.g Octopus bimaculoides Ocbimv22024932m.g I
OCS_00196 Ophiocordyceps sinensis OCS_00196 I
F503_03625 Ophiostoma piceae uamh F503_03625 I
F503_06490 Ophiostoma piceae uamh F503_06490 I
PABG_05778 Paracoccidioides brasiliensis PABG_05778 I
Pc22g06930 Penicillium chrysogenum Pc22g06930 I
PITC_068990 Penicillium italicum PITC_068990 I
PITC_063570 Penicillium italicum PITC_063570 I
PMAA_003200 Penicillium marneffei PMAA_003200 I
PDE_06698 Penicillium oxalicum PDE_06698 I
PDE_01613 Penicillium oxalicum PDE_01613 I
PCH_Pc22g06930 Penicillium rubens PCH_Pc22g06930 I
U727_00429890111 Penicillium solitum U727_00429890111 I
U727_00431010161 Penicillium solitum U727_00431010161 I
gw1.41.85.1 Phycomyces blakesleeanus gw1.41.85.1 I
PODANS_1_20590 Podospora anserina PODANS_1_20590 I
GLOINDRAFT_60750 Rhizophagus irregularis GLOINDRAFT_60750 I
GLOINDRAFT_44046 Rhizophagus irregularis GLOINDRAFT_44046 I
GLOINDRAFT_50485 Rhizophagus irregularis GLOINDRAFT_50485 I
GLOINDRAFT_81724 Rhizophagus irregularis GLOINDRAFT_81724 I
SOCG_02523 Schizosaccharomyces octosporus SOCG_02523 I
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I
SBOR_9074 Sclerotinia borealis SBOR_9074 I
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I
SETTUDRAFT_174840 Setosphaeria turcica SETTUDRAFT_174840 I
SMAC_05404 Sordaria macrospora SMAC_05404 I
SMAC_07212 Sordaria macrospora SMAC_07212 I
SPBR_08948 Sporothrix brasiliensis SPBR_08948 I
HMPREF1624_05084 Sporothrix schenckii HMPREF1624_05084 I
S40288_01998 Stachybotrys chartarum S40288_01998 I
SMUV_0000981301 Syphacia muris SMUV_0000981301 I
PMAA_003200 Talaromyces marneffei PMAA_003200 I
TSTA_008530 Talaromyces stipitatus TSTA_008530 I
VHEMI07104 Torrubiella hemipterigena VHEMI07104 I
BN946_scf184994.g60 Trametes cinnabarina BN946_scf184994.g60 N
TRIREDRAFT_124341 Trichoderma reesei TRIREDRAFT_124341 I
TRIVIDRAFT_52649 Trichoderma virens TRIVIDRAFT_52649 N
TEQG_04869 Trichophyton equinum TEQG_04869 I
H101_00568 Trichophyton interdigitale H101_00568 I
UV8b_1585 Ustilaginoidea virens UV8b_1585 I
VDAG_02444 Verticillium dahliae VDAG_02444 I