CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TLX2 *(Pan troglodytes)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSPTRG00000012095	T215067_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TLX2 M02087_2.00	Homo sapiens	NYRDNNNNNN	NNNNNNHYRN	PBM Weirauch et al.(2014) pTH6482	0.867	1.000
Tlx2 M00526_2.00	Mus musculus	WTTAAWTA	TAWTTAAW	PBM Berger et al.(2008) Tlx2_3498	0.867	1.000
TLX2 M05020_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) TLX2_eDBD_HT-SELEX	0.867	1.000
TLX2 M10672_2.00	Homo sapiens	BNGTAAKDNB	VNHMTTACNV	Transfac Matys et al.(2006) V$NCX_01	0.867	1.000
TLX2 M05021_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) TLX2_eDBD_Methyl-HT-SELEX	0.867	1.000
C15 M06505_2.00	Drosophila melanogaster	TTAAWKR	YMWTTAA	B1H Mathelier et al.(2014) MA0170.1	0.846	0.842
C15 M06289_2.00	Drosophila melanogaster	BTTAAWKR	YMWTTAAV	B1H Zhu et al.(2011) C15_Cell_FBgn0004863	0.846	0.842
C15 M06290_2.00	Drosophila melanogaster	NWTAAWKR	YMWTTAWN	B1H Zhu et al.(2011) C15_SOLEXA_FBgn0004863	0.846	0.842
TLX3 M05233_2.00	Homo sapiens	NAATKGNNNNNNNNNNNNNCAATTN	NAATTGNNNNNNNNNNNNNCMATTN	SELEX Yin et al.(2017) TLX3_eDBD_HT-SELEX	0.806	0.877
TLX3 M05235_2.00	Homo sapiens	NAATTGNNNNNHNNNNCAATTN	NAATTGNNNNDNNNNNCAATTN	SELEX Yin et al.(2017) TLX3_FL_HT-SELEX	0.806	0.877
TLX3 M05234_2.00	Homo sapiens	NAATTGNNNNNNNNNNDCAATTD	HAATTGHNNNNNNNNNNCAATTN	SELEX Yin et al.(2017) TLX3_eDBD_Methyl-HT-SELEX	0.806	0.877
TLX3 M05236_2.00	Homo sapiens	HAATTRNNNNNNNNNYHATTV	BAATDRNNNNNNNNNYAATTD	SELEX Yin et al.(2017) TLX3_FL_Methyl-HT-SELEX	0.806	0.877
ENSTNIG00000006040 M02106_2.00	Tetraodon nigroviridis	NNNBTAAWHRBNN	NNVYDWTTAVNNN	PBM Weirauch et al.(2014) pTH6503	0.716	0.632
Barhl2 M00460_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl2_3868	0.716	0.614
BARHL2 M03157_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_1	0.716	0.614
BARHL2 M03158_2.00	Homo sapiens	NNTAAWBGNN	NNCVWTTANN	SELEX Jolma et al.(2013) BARHL2_2	0.716	0.614
BARHL2 M03159_2.00	Homo sapiens	TAAWYGNNNNTAAWYR	YRWTTANNNNCRWTTA	SELEX Jolma et al.(2013) BARHL2_3	0.716	0.614
BARHL2 M03160_2.00	Homo sapiens	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_4	0.716	0.614
BARHL2 M03161_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_5	0.716	0.614
BARHL2 M03162_2.00	Homo sapiens	TAAWYGNYNHTAAWYG	CRWTTADNRNCRWTTA	SELEX Jolma et al.(2013) BARHL2_6	0.716	0.614
BARHL2 M05164_2.00	Homo sapiens	HTAAAYGNY	RNCRTTTAD	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_1	0.716	0.614
BARHL2 M05165_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_2	0.716	0.614
BARHL2 M05167_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_1	0.716	0.614
BARHL2 M05168_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_2	0.716	0.614
BARHL2 M05166_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_Methyl-HT-SELEX	0.716	0.614
BARHL2 M05169_2.00	Homo sapiens	NTAAWTGN	NCAWTTAN	SELEX Yin et al.(2017) BARHL2_FL_Methyl-HT-SELEX	0.716	0.614
Barhl1 M00433_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl1_2590	0.704	0.579
Barhl1 M03258_2.00	Mus musculus	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) Barhl1_1	0.704	0.579
Barhl1 M03259_2.00	Mus musculus	NNTAADNRNN	NNYNHTTANN	SELEX Jolma et al.(2013) Barhl1_2	0.704	0.579
Barhl1 M03260_2.00	Mus musculus	TAAWYGNYNNTAAWYG	CRWTTANNRNCRWTTA	SELEX Jolma et al.(2013) Barhl1_3	0.704	0.579
BARHL1 M05091_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_1	0.704	0.579
BARHL1 M05092_2.00	Homo sapiens	NTAADBGN	NCVHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_2	0.704	0.579
BARHL1 M05093_2.00	Homo sapiens	NTAADKGN	NCMHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_Methyl-HT-SELEX	0.704	0.579
B-H1 M03829_2.00	Drosophila melanogaster	VNTAAWYGNN	NNCRWTTANB	SELEX Nitta et al.(2015) B-H1_1	0.704	0.561
B-H1 M03830_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H1_2	0.704	0.561
B-H1 M06512_2.00	Drosophila melanogaster	HTAAWYG	CRWTTAD	B1H Mathelier et al.(2014) MA0168.1	0.704	0.561
B-H2 M03810_2.00	Drosophila melanogaster	VNTAAAYGNH	DNCRTTTANB	SELEX Nitta et al.(2015) B-H2_1	0.704	0.544
B-H2 M03811_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H2_2	0.704	0.544
B-H2 M06503_2.00	Drosophila melanogaster	WTAATTG	CAATTAW	B1H Mathelier et al.(2014) MA0169.1	0.704	0.544
Hmx2 M00507_2.00	Mus musculus	NHRANYGNNN	NNNCRNTYDN	PBM Berger et al.(2008) Hmx2_3424	0.703	0.632
HMX2 M03234_2.00	Homo sapiens	NNTTAAKTGNN	NNCAMTTAANN	SELEX Jolma et al.(2013) HMX2_1	0.703	0.632
HMX2 M05373_2.00	Homo sapiens	GNHRAKYGS	SCRMTYDNC	SELEX Yin et al.(2017) HMX2_eDBD_HT-SELEX	0.703	0.632
HMX2 M05375_2.00	Homo sapiens	NTTAAKTGNN	NNCAMTTAAN	SELEX Yin et al.(2017) HMX2_FL_HT-SELEX	0.703	0.632
HMX2 M05374_2.00	Homo sapiens	NNTAAKTGN	NCAMTTANN	SELEX Yin et al.(2017) HMX2_eDBD_Methyl-HT-SELEX	0.703	0.632
HMX2 M05376_2.00	Homo sapiens	NTTAAKTGNN	NNCAMTTAAN	SELEX Yin et al.(2017) HMX2_FL_Methyl-HT-SELEX	0.703	0.632
lms M03863_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) CG13424_1	0.688	0.596
lms M03864_2.00	Drosophila melanogaster	HTWATTRDWTDATTRR	YYAATHAWHYAATWAD	SELEX Nitta et al.(2015) lms_1	0.688	0.596
lms M06536_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0175.1	0.688	0.596
lms M06347_2.00	Drosophila melanogaster	NYTAATKR	YMATTARN	B1H Zhu et al.(2011) CG13424_Cell_FBgn0034520	0.688	0.596
lms M06348_2.00	Drosophila melanogaster	NNHTAATDRN	NYHATTADNN	B1H Zhu et al.(2011) CG13424_SOLEXA_2_FBgn0034520	0.688	0.596
lms M06349_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) CG13424_SOLEXA_FBgn0034520	0.688	0.596
Hmx M03882_2.00	Drosophila melanogaster	NYRAKYGN	NCRMTYRN	SELEX Nitta et al.(2015) Hmx_1	0.687	0.614
Hmx M06554_2.00	Drosophila melanogaster	TTAATTG	CAATTAA	B1H Mathelier et al.(2014) MA0192.1	0.687	0.614
Hmx M06386_2.00	Drosophila melanogaster	TTAATTG	CAATTAA	B1H Zhu et al.(2011) Hmx_Cell_FBgn0085448	0.687	0.614
Hmx M06387_2.00	Drosophila melanogaster	TTAATTG	CAATTAA	B1H Zhu et al.(2011) Hmx_SOLEXA_FBgn0085448	0.687	0.614
Hmx1 M00524_2.00	Mus musculus	NHDAKYRNNN	NNNYRMTHDN	PBM Berger et al.(2008) Hmx1_3423	0.686	0.632
HMX1 M03243_2.00	Homo sapiens	NNTTAAKTGNY	RNCAMTTAANN	SELEX Jolma et al.(2013) HMX1_1	0.686	0.632
HMX1 M05392_2.00	Homo sapiens	BNYAAKTGN	NCAMTTRNV	SELEX Yin et al.(2017) HMX1_eDBD_HT-SELEX	0.686	0.632
HMX1 M05393_2.00	Homo sapiens	VNYAAKTGB	VCAMTTRNB	SELEX Yin et al.(2017) HMX1_eDBD_Methyl-HT-SELEX	0.686	0.632
HMX3 M03233_2.00	Homo sapiens	NNNTAAKTGNN	NNCAMTTANNN	SELEX Jolma et al.(2013) HMX3_1	0.686	0.614
HMX3 M10754_2.00	Homo sapiens	CAAGTGCGTG	CACGCACTTG	Transfac Matys et al.(2006) V$HMX1_01	0.686	0.614
NK7.1 M03847_2.00	Drosophila melanogaster	VTTAAAYGDTD	HAHCRTTTAAB	SELEX Nitta et al.(2015) NK7.1_1	0.681	0.544
NK7.1 M03848_2.00	Drosophila melanogaster	NSTTAATTGVY	RBCAATTAASN	SELEX Nitta et al.(2015) NK7.1_2	0.681	0.544
NK7.1 M06524_2.00	Drosophila melanogaster	TTAATDR	YHATTAA	B1H Mathelier et al.(2014) MA0196.1	0.681	0.544
NK7.1 M06323_2.00	Drosophila melanogaster	NTTAATDR	YHATTAAN	B1H Zhu et al.(2011) NK7.1_Cell_FBgn0024321	0.681	0.544
NK7.1 M06324_2.00	Drosophila melanogaster	YTAATDR	YHATTAR	B1H Zhu et al.(2011) NK7.1_SOLEXA_FBgn0024321	0.681	0.544
Hmx3_CONSTRUCT M00537_2.00	PBM CONSTRUCTS	NHDADYRNN	NNYRHTHDN	PBM Berger et al.(2008) Hmx3_3490	0.672	0.596
ceh-5 M02179_2.00	Caenorhabditis elegans	NNTAATDDN	NHHATTANN	PBM Weirauch et al.(2014) pTH6562	0.661	0.491
Q70HR3_PLEPI M02210_2.00	Pleurobrachia pileus	NVVTACTWRD	HYWAGTABBN	PBM Weirauch et al.(2014) pTH6529	0.658	0.561
EMX1 M02088_2.00	Homo sapiens	NNTAATKANN	NNTMATTANN	PBM Weirauch et al.(2014) pTH5677	0.656	0.544
Emx2 M00495_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Emx2_3420	0.656	0.544
ems M02114_2.00	Drosophila melanogaster	NTAATKRNB	VNYMATTAN	PBM Weirauch et al.(2014) pTH5673	0.656	0.544
EMX1 M03151_2.00	Homo sapiens	NBTAATTRNN	NNYAATTAVN	SELEX Jolma et al.(2013) EMX1_1	0.656	0.544
EMX1 M03152_2.00	Homo sapiens	YMATTARYTAATKR	YMATTARYTAATKR	SELEX Jolma et al.(2013) EMX1_2	0.656	0.544
EMX2 M03210_2.00	Homo sapiens	NBTAATTANN	NNTAATTAVN	SELEX Jolma et al.(2013) EMX2_1	0.656	0.544
EMX2 M03211_2.00	Homo sapiens	YMATTARBTAATKR	YMATTAVYTAATKR	SELEX Jolma et al.(2013) EMX2_2	0.656	0.544
ems M03789_2.00	Drosophila melanogaster	BTAATTAN	NTAATTAV	SELEX Nitta et al.(2015) ems_1	0.656	0.544
ems M03790_2.00	Drosophila melanogaster	BTAATTAVBVBTAATKRN	NYMATTAVBVBTAATTAV	SELEX Nitta et al.(2015) ems_2	0.656	0.544
ems M03791_2.00	Drosophila melanogaster	BTAATKRN	NYMATTAV	SELEX Nitta et al.(2015) ems_3	0.656	0.544
ems M03792_2.00	Drosophila melanogaster	STAATKRSSSSTAATKRV	BYMATTASSSSYMATTAS	SELEX Nitta et al.(2015) ems_4	0.656	0.544
EMX1 M05145_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_HT-SELEX	0.656	0.544
EMX1 M05147_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) EMX1_FL_HT-SELEX	0.656	0.544
EMX2 M05281_2.00	Homo sapiens	YTAATKAB	VTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_HT-SELEX	0.656	0.544
ems M06484_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Mathelier et al.(2014) MA0219.1	0.656	0.544
ems M06233_2.00	Drosophila melanogaster	WHTAATKR	YMATTADW	B1H Zhu et al.(2011) Ems_Cell_FBgn0000576	0.656	0.544
ems M06234_2.00	Drosophila melanogaster	TSTMATHM	KDATKASA	B1H Zhu et al.(2011) ems_FlyReg_FBgn0000576	0.656	0.544
ems M06235_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Ems_SOLEXA_FBgn0000576	0.656	0.544
ems M09676_2.00	Drosophila melanogaster	WTWATGA	TCATWAW	Misc Kulakovskiy et al.(2009) ems	0.656	0.544
EMX1 M05146_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_Methyl-HT-SELEX	0.656	0.544
EMX1 M05148_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_FL_Methyl-HT-SELEX	0.656	0.544
EMX2 M05282_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_Methyl-HT-SELEX	0.656	0.544
E5 M03814_2.00	Drosophila melanogaster	STAATKNN	NNMATTAS	SELEX Nitta et al.(2015) E5_1	0.656	0.526
E5 M06507_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0189.1	0.656	0.526
E5 M06293_2.00	Drosophila melanogaster	NBTAATKA	TMATTAVN	B1H Zhu et al.(2011) E5_Cell_FBgn0008646	0.656	0.526
E5 M06294_2.00	Drosophila melanogaster	NTAATDR	YHATTAN	B1H Zhu et al.(2011) E5_SOLEXA_FBgn0008646	0.656	0.526
VAX2 M00284_2.00	Homo sapiens	NNTAATND	HNATTANN	PBM Barrera et al.(2016) VAX2_REF	0.649	0.474
Vax1 M00398_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Vax1_3499	0.649	0.474
Vax2 M00464_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Vax2_3500	0.649	0.474
VAX2 M03119_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Jolma et al.(2013) VAX2_1	0.649	0.474
VAX2 M05030_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_HT-SELEX	0.649	0.474
Vax1 M10764_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$VAX1_04	0.649	0.474
VAX2 M05031_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_Methyl-HT-SELEX	0.649	0.474
VAX2 M00283_2.00	Homo sapiens	NNTAAWNDNN	NNHNWTTANN	PBM Barrera et al.(2016) VAX2_L139M	0.643	0.456
CG11085 M03857_2.00	Drosophila melanogaster	BTAAWYGN	NCRWTTAV	SELEX Nitta et al.(2015) CG11085_1	0.642	0.509
CG11085 M03858_2.00	Drosophila melanogaster	NTAAWCGN	NCGWTTAN	SELEX Nitta et al.(2015) CG11085_2	0.642	0.509
CG11085 M06532_2.00	Drosophila melanogaster	TTAATDG	CHATTAA	B1H Mathelier et al.(2014) MA0171.1	0.642	0.509
CG11085 M06339_2.00	Drosophila melanogaster	NTTAATDGV	BCHATTAAN	B1H Zhu et al.(2011) CG11085_Cell_FBgn0030408	0.642	0.509
CG11085 M06340_2.00	Drosophila melanogaster	NHTAAWBRNN	NNYVWTTADN	B1H Zhu et al.(2011) CG11085_SOLEXA_FBgn0030408	0.642	0.509
Hoxb4 M00479_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxb4_2627	0.630	0.474
HOXB4 M05343_2.00	Homo sapiens	YTAATKAY	RTMATTAR	SELEX Yin et al.(2017) HOXB4_FL_HT-SELEX	0.630	0.474
HOXB4 M09162_2.00	Homo sapiens	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_HUMAN.H11MO.0.B	0.630	0.474
Hoxb4 M09204_2.00	Mus musculus	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_MOUSE.H11MO.0.A	0.630	0.474
Hoxb4 M09576_2.00	Mus musculus	TGATDRATKRSN	NSYMATYHATCA	Misc Heinz et al.(2010) ES-Hoxb4_GSE34014	0.630	0.474
HOXB4 M05344_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_1	0.630	0.474
HOXB4 M05345_2.00	Homo sapiens	HTAAYKAB	VTMRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_2	0.630	0.474
Hoxa4 M00383_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Hoxa4_3426	0.618	0.474
HOXA4 M05381_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXA4_eDBD_HT-SELEX	0.618	0.474
HOXA4 M10755_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA4_Q2	0.618	0.474
HOXA4 M05382_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA4_eDBD_Methyl-HT-SELEX	0.618	0.474
HOXC4 M00330_2.00	Homo sapiens	YTAATTRB	VYAATTAR	PBM Barrera et al.(2016) HOXC4_REF	0.618	0.456
Hoxc4 M00530_2.00	Mus musculus	NWAATNDNN	NNHNATTWN	PBM Berger et al.(2008) Hoxc4_3491	0.618	0.456
HOXC4 M05385_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_HT-SELEX	0.618	0.456
HOXD4 M05273_2.00	Homo sapiens	NTMATKRV	BYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_HT-SELEX	0.618	0.456
HOXD4 M05276_2.00	Homo sapiens	NTAATKRB	VYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_HT-SELEX	0.618	0.456
HOXC4 M00328_2.00	Homo sapiens	YTAATTAB	VTAATTAR	PBM Barrera et al.(2016) HOXC4_N178S	0.618	0.456
HOXC4 M00329_2.00	Homo sapiens	NTAATKRNN	NNYMATTAN	PBM Barrera et al.(2016) HOXC4_R158L	0.618	0.456
HOXC4 M05386_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_1	0.618	0.456
HOXC4 M05387_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_2	0.618	0.456
HOXD4 M05274_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_1	0.618	0.456
HOXD4 M05275_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_2	0.618	0.456
HOXD4 M05277_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_1	0.618	0.456
HOXD4 M05278_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_2	0.618	0.456
Nkx1-1 M00442_2.00	Mus musculus	NNTAATNDNN	NNHNATTANN	PBM Berger et al.(2008) Nkx1-1_3856	0.617	0.474
Nkx1-2 M00503_2.00	Mus musculus	NNTAAWNDN	NHNWTTANN	PBM Berger et al.(2008) Nkx1-2_3214	0.617	0.474
slou M00557_2.00	Drosophila melanogaster	NNTAATDRN	NYHATTANN	PBM Busser et al.(2012a) Slou	0.617	0.474
slou M03798_2.00	Drosophila melanogaster	VBTAATTRSB	VSYAATTAVB	SELEX Nitta et al.(2015) slou_1	0.617	0.474
slou M06494_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0245.1	0.617	0.474
slou M06262_2.00	Drosophila melanogaster	BYTAATKR	YMATTARV	B1H Zhu et al.(2011) Slou_Cell_FBgn0002941	0.617	0.474
slou M06263_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Zhu et al.(2011) Slou_SOLEXA_FBgn0002941	0.617	0.474
Lbx2 M00465_2.00	Mus musculus	NHAABNRN	NYNVTTDN	PBM Berger et al.(2008) Lbx2_3869	0.615	0.614
LBX2 M03224_2.00	Homo sapiens	TAAYYRSNTYNAB	VTNRANSYRRTTA	SELEX Jolma et al.(2013) LBX2_1	0.615	0.614
LBX2 M03225_2.00	Homo sapiens	NNTAATTRVN	NBYAATTANN	SELEX Jolma et al.(2013) LBX2_2	0.615	0.614
LBX2 M05321_2.00	Homo sapiens	HTAAYRAG	CTYRTTAD	SELEX Yin et al.(2017) LBX2_eDBD_HT-SELEX_1	0.615	0.614
LBX2 M05322_2.00	Homo sapiens	NTAATTAAYKRG	CYMRTTAATTAN	SELEX Yin et al.(2017) LBX2_eDBD_HT-SELEX_2	0.615	0.614
LBX2 M05323_2.00	Homo sapiens	VYTAATTRGB	VCYAATTARB	SELEX Yin et al.(2017) LBX2_eDBD_HT-SELEX_3	0.615	0.614
LBX2 M05324_2.00	Homo sapiens	HTAAYGAG	CTCRTTAD	SELEX Yin et al.(2017) LBX2_eDBD_Methyl-HT-SELEX_1	0.615	0.614
LBX2 M05325_2.00	Homo sapiens	ATAATTAATKAG	CTMATTAATTAT	SELEX Yin et al.(2017) LBX2_eDBD_Methyl-HT-SELEX_2	0.615	0.614
LBX2 M05326_2.00	Homo sapiens	NNTAATKRDN	NHYMATTANN	SELEX Yin et al.(2017) LBX2_eDBD_Methyl-HT-SELEX_3	0.615	0.614
lin-39 M08211_2.00	Caenorhabditis elegans	GATTGATG	CATCAATC	ChIP-seq Contrino et al.(2012) Mw154	0.607	0.491
lin-39 M09582_2.00	Caenorhabditis elegans	DTGATWRATK	MATYWATCAH	Misc Heinz et al.(2010) cElegans.L3-LIN39_modEncode	0.607	0.491
VENTX M02091_2.00	Homo sapiens	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH5490	0.604	0.439
VENTX M00305_2.00	Homo sapiens	DTAATTRR	YYAATTAH	PBM Barrera et al.(2016) VENTX_REF	0.604	0.439
VENTX M03169_2.00	Homo sapiens	YTAATBGNT	ANCVATTAR	SELEX Jolma et al.(2013) VENTX_1	0.604	0.439
VENTX M03170_2.00	Homo sapiens	VSYTAATSGRWAAMCGATTAG	CTAATCGKTTWYCSATTARSB	SELEX Jolma et al.(2013) VENTX_2	0.604	0.439
VENTX M05188_2.00	Homo sapiens	CGHTAATBG	CVATTADCG	SELEX Yin et al.(2017) VENTX_FL_HT-SELEX_1	0.604	0.439
VENTX M05189_2.00	Homo sapiens	VNTAATBRNN	NNYVATTANB	SELEX Yin et al.(2017) VENTX_FL_HT-SELEX_2	0.604	0.439
VENTX M00303_2.00	Homo sapiens	NVTAATTANNN	NNNTAATTABN	PBM Barrera et al.(2016) VENTX_E101K	0.604	0.439
VENTX M05190_2.00	Homo sapiens	VHTAATKRNN	NNYMATTADB	SELEX Yin et al.(2017) VENTX_FL_Methyl-HT-SELEX	0.604	0.439
VENTX M00304_2.00	Homo sapiens	NATAYATAB	VTATRTATN	PBM Barrera et al.(2016) VENTX_R143C	0.604	0.421
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSPTRP00000020756	Homeodomain	158	214	KKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRR

Links
Other Homeodomain family TFs
Other *Pan troglodytes* TFs

2083 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
F775_02947	Aegilops tauschii	F775_02947	N
F775_03185	Aegilops tauschii	F775_03185	N
F775_23458	Aegilops tauschii	F775_23458	N
F775_25020	Aegilops tauschii	F775_25020	N
F775_43492	Aegilops tauschii	F775_43492	N
AMTR_s00024p00250370	Amborella trichopoda	AMTR_s00024p00250370	N
Aquca_041_00164	Aquilegia coerulea	Aquca_041_00164	N
RSL1	Arabidopsis lyrata	fgenesh2_kg.7__3192__AT5G37800.1	N
RHD6	Arabidopsis lyrata	scaffold_201372.1	N
BHLH83	Arabidopsis thaliana	AT1G66470	N
BHLH86	Arabidopsis thaliana	AT5G37800	N
Bostr.9638s0100	Boechera stricta	Bostr.9638s0100	N
BRADI1G42440	Brachypodium distachyon	BRADI1G42440	N
BRADI2G01000	Brachypodium distachyon	BRADI2G01000	N
BRADI3G53060	Brachypodium distachyon	BRADI3G53060	N
Bo00835s050	Brassica oleracea	Bo00835s050	N
Bo6g101000	Brassica oleracea	Bo6g101000	N
Bra019708	Brassica rapa	Bra019708	N
Cagra.2629s0001	Capsella grandiflora	Cagra.2629s0001	N
Cagra.8123s0001	Capsella grandiflora	Cagra.8123s0001	N
Carubv10007389m.g	Capsella rubella	Carubv10007389m.g	N
Carubv10021322m.g	Capsella rubella	Carubv10021322m.g	N
evm.TU.contig_27490	Carica papaya	evm.TU.contig_27490	N
Ca_16136	Cicer arietinum	Ca_16136	N
Cla020067	Citrullus lanatus	Cla020067	N
Ciclev10013420m.g	Citrus clementina	Ciclev10013420m.g	N
orange1.1g038918m.g	Citrus sinensis	orange1.1g038918m.g	N
Cucsa.006340	Cucumis sativus	Cucsa.006340	N
Eucgr.F02831	Eucalyptus grandis	Eucgr.F02831	N
Thhalv10018927m.g	Eutrema salsugineum	Thhalv10018927m.g	N
Thhalv10028239m.g	Eutrema salsugineum	Thhalv10028239m.g	N
gene17937-v1.0-hybrid	Fragaria vesca	gene17937-v1.0-hybrid	N
GLYMA02G41370	Glycine max	GLYMA02G41370	N
GLYMA11G33840	Glycine max	GLYMA11G33840	N
GLYMA14G07590	Glycine max	GLYMA14G07590	N
GLYMA18G04420	Glycine max	GLYMA18G04420	N
Gorai.001G086800	Gossypium raimondii	Gorai.001G086800	N
Gorai.004G064400	Gossypium raimondii	Gorai.004G064400	N
MLOC_37511	Hordeum vulgare	MLOC_37511	N
LPERR01G00690	Leersia perrieri	LPERR01G00690	N
LPERR02G24230	Leersia perrieri	LPERR02G24230	N
Lus10017634.g	Linum usitatissimum	Lus10017634.g	N
Lus10033592.g	Linum usitatissimum	Lus10033592.g	N
MDP0000435722	Malus domestica	MDP0000435722	N
cassava10199.m1	Manihot esculenta	cassava10199.m1	N
MTR_5g079500	Medicago truncatula	MTR_5g079500	N
mgf025678m	Mimulus guttatus	mgf025678m	N
GSMUA_Achr10G20230_001	Musa acuminata	GSMUA_Achr10G20230_001	N
GSMUA_Achr2G22860_001	Musa acuminata	GSMUA_Achr2G22860_001	N
GSMUA_Achr3G01250_001	Musa acuminata	GSMUA_Achr3G01250_001	N
GSMUA_Achr6G09370_001	Musa acuminata	GSMUA_Achr6G09370_001	N
OBART01G00850	Oryza barthii	OBART01G00850	N
OBART02G29800	Oryza barthii	OBART02G29800	N
OB0081G10010	Oryza brachyantha	OB0081G10010	N
OB01G10850	Oryza brachyantha	OB01G10850	N
OB02G36990	Oryza brachyantha	OB02G36990	N
ORGLA01G0007400	Oryza glaberrima	ORGLA01G0007400	N
ORGLA02G0253300	Oryza glaberrima	ORGLA02G0253300	N
OGLUM01G00830	Oryza glumaepatula	OGLUM01G00830	N
OGLUM02G30450	Oryza glumaepatula	OGLUM02G30450	N
BGIOSGA002533	Oryza indica	BGIOSGA002533	N
BGIOSGA008903	Oryza indica	BGIOSGA008903	N
OLONG_010619	Oryza longistaminata	OLONG_010619	N
OMERI01G00290	Oryza meridionalis	OMERI01G00290	N
OMERI02G28660	Oryza meridionalis	OMERI02G28660	N
ONIVA01G00780	Oryza nivara	ONIVA01G00780	N
ONIVA02G32560	Oryza nivara	ONIVA02G32560	N
OPUNC01G00700	Oryza punctata	OPUNC01G00700	N
OPUNC02G27370	Oryza punctata	OPUNC02G27370	N
ORUFI01G00830	Oryza rufipogon	ORUFI01G00830	N
ORUFI02G31420	Oryza rufipogon	ORUFI02G31420	N
OS01G0111500	Oryza sativa	OS01G0111500	N
OS02G0710300	Oryza sativa	OS02G0710300	N
Pavir.Aa00611	Panicum virgatum	Pavir.Aa00611	N
Pavir.Db01008	Panicum virgatum	Pavir.Db01008	N
Pavir.Eb00817	Panicum virgatum	Pavir.Eb00817	N
Pavir.J04215	Panicum virgatum	Pavir.J04215	N
Pavir.J20533	Panicum virgatum	Pavir.J20533	N
estExt_fgenesh1_pg.C_1470079	Physcomitrella patens	estExt_fgenesh1_pg.C_1470079	N
estExt_fgenesh1_pg.C_840011	Physcomitrella patens	estExt_fgenesh1_pg.C_840011	N
POPTR_0004s08770	Populus trichocarpa	POPTR_0004s08770	N
POPTR_0005s14360	Populus trichocarpa	POPTR_0005s14360	N
Pm014359	Prunus mume	Pm014359	N
PRUPE_ppa025775mg	Prunus persica	PRUPE_ppa025775mg	N
28609.m000209	Ricinus communis	28609.m000209	N
SapurV1A.0102s0280	Salix purpurea	SapurV1A.0102s0280	N
SapurV1A.0230s0340	Salix purpurea	SapurV1A.0230s0340	N
SELMODRAFT_409967	Selaginella moellendorffii	SELMODRAFT_409967	N
SELMODRAFT_413232	Selaginella moellendorffii	SELMODRAFT_413232	N
SELMODRAFT_414414	Selaginella moellendorffii	SELMODRAFT_414414	N
SELMODRAFT_418491	Selaginella moellendorffii	SELMODRAFT_418491	N
SELMODRAFT_423809	Selaginella moellendorffii	SELMODRAFT_423809	N
SELMODRAFT_426794	Selaginella moellendorffii	SELMODRAFT_426794	N
Si004720m.g	Setaria italica	Si004720m.g	N
Si019575m.g	Setaria italica	Si019575m.g	N
Solyc02g091440.1	Solanum lycopersicum	Solyc02g091440.1	N
PGSC0003DMG400030650	Solanum tuberosum	PGSC0003DMG400030650	N
Sb03g008290	Sorghum bicolor	Sb03g008290	N
Sb04g030230	Sorghum bicolor	Sb04g030230	N
TCM_019210	Theobroma cacao	TCM_019210	N
Traes_3AS_0D78930B4	Triticum aestivum	Traes_3AS_0D78930B4	N
TRAES3BF060500180CFD_g	Triticum aestivum	TRAES3BF060500180CFD_g	N
Traes_6BL_9B25E6A10	Triticum aestivum	Traes_6BL_9B25E6A10	N
Traes_6BL_A964BE52B	Triticum aestivum	Traes_6BL_A964BE52B	N
Traes_6DL_3DCFAB31F	Triticum aestivum	Traes_6DL_3DCFAB31F	N
Traes_7BS_A0A8B25DF	Triticum aestivum	Traes_7BS_A0A8B25DF	N
Traes_7DS_4053B6E88	Triticum aestivum	Traes_7DS_4053B6E88	N
TRIUR3_11692	Triticum urartu	TRIUR3_11692	N
TRIUR3_14379	Triticum urartu	TRIUR3_14379	N
TRIUR3_27166	Triticum urartu	TRIUR3_27166	N
VIT_14s0006g01470	Vitis vinifera	VIT_14s0006g01470	N
AC216731.3_FG001	Zea mays	AC216731.3_FG001	N
GRMZM2G066057	Zea mays	GRMZM2G066057	N

TLX2 (Pan troglodytes) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2083 Related TFs

TLX2 **(Pan troglodytes)
Homeodomain**