CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTRUG00000011945
(
Takifugu rubripes
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSTRUG00000011945
T216745_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000030235
Homeodomain
156
210
RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKL
ENSTRUP00000030235
Homeodomain
300
351
LSSPDPTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK
Links
Other
Homeodomain
family TFs
Other
Takifugu rubripes
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_10743
Aegilops tauschii
F775_10743
I
0.000
F775_31139
Aegilops tauschii
F775_31139
I
0.000
AMTR_s00022p00198330
Amborella trichopoda
AMTR_s00022p00198330
I
0.000
AMTR_s00045p00076020
Amborella trichopoda
AMTR_s00045p00076020
I
0.000
AMTR_s00106p00142470
Amborella trichopoda
AMTR_s00106p00142470
I
0.000
Aquca_009_00161
Aquilegia coerulea
Aquca_009_00161
I
0.000
Aquca_029_00063
Aquilegia coerulea
Aquca_029_00063
I
0.000
SPL1
Arabidopsis lyrata
fgenesh2_kg.4__2943__AT2G47070.1
I
0.000
SPL12
Arabidopsis lyrata
scaffold_503227.1
I
0.000
SPL1
Arabidopsis thaliana
AT2G47070
D
0.000
SPL12
Arabidopsis thaliana
AT3G60030
D
0.000
Bostr.25993s0059
Boechera stricta
Bostr.25993s0059
I
0.000
Bostr.25993s0559
Boechera stricta
Bostr.25993s0559
I
0.000
Bostr.29344s0010
Boechera stricta
Bostr.29344s0010
I
0.000
BRADI1G02760
Brachypodium distachyon
BRADI1G02760
I
0.000
BRADI3G40030
Brachypodium distachyon
BRADI3G40030
I
0.000
BRADI4G33770
Brachypodium distachyon
BRADI4G33770
I
0.000
Bo4g005730
Brassica oleracea
Bo4g005730
I
0.000
Bo4g015800
Brassica oleracea
Bo4g015800
I
0.000
Bo4g191350
Brassica oleracea
Bo4g191350
I
0.000
Bra004674
Brassica rapa
Bra004674
I
0.000
Bra016891
Brassica rapa
Bra016891
I
0.000
Bra041037
Brassica rapa
Bra041037
I
0.000
PK06791.1
Cannabis sativa
PK06791.1
D
0.000
PK11310.1
Cannabis sativa
PK11310.1
I
0.000
PK18312.1
Cannabis sativa
PK18312.1
I
0.000
Cagra.16630s0008
Capsella grandiflora
Cagra.16630s0008
I
0.000
Cagra.3527s0045
Capsella grandiflora
Cagra.3527s0045
I
0.000
Carubv10016658m.g
Capsella rubella
Carubv10016658m.g
I
0.000
evm.TU.supercontig_146.32
Carica papaya
evm.TU.supercontig_146.32
I
0.000
evm.TU.supercontig_149.2
Carica papaya
evm.TU.supercontig_149.2
I
0.000
evm.TU.supercontig_80.88
Carica papaya
evm.TU.supercontig_80.88
I
0.000
Ca_03548
Cicer arietinum
Ca_03548
I
0.000
Ca_07299
Cicer arietinum
Ca_07299
I
0.000
Ca_10879
Cicer arietinum
Ca_10879
I
0.000
Ca_16243
Cicer arietinum
Ca_16243
I
0.000
Ca_24655
Cicer arietinum
Ca_24655
I
0.000
Cla021411
Citrullus lanatus
Cla021411
I
0.000
Ciclev10004227m.g
Citrus clementina
Ciclev10004227m.g
I
0.000
Ciclev10009879m.g
Citrus clementina
Ciclev10009879m.g
I
0.000
Ciclev10011938m.g
Citrus clementina
Ciclev10011938m.g
I
0.000
Ciclev10016841m.g
Citrus clementina
Ciclev10016841m.g
I
0.000
Ciclev10018697m.g
Citrus clementina
Ciclev10018697m.g
I
0.000
Ciclev10031270m.g
Citrus clementina
Ciclev10031270m.g
I
0.000
orange1.1g001971m.g
Citrus sinensis
orange1.1g001971m.g
I
0.000
orange1.1g009653m.g
Citrus sinensis
orange1.1g009653m.g
I
0.000
orange1.1g029650m.g
Citrus sinensis
orange1.1g029650m.g
I
0.000
orange1.1g032937m.g
Citrus sinensis
orange1.1g032937m.g
I
0.000
orange1.1g046416m.g
Citrus sinensis
orange1.1g046416m.g
I
0.000
Cucsa.242790
Cucumis sativus
Cucsa.242790
I
0.000
Eucgr.A01019
Eucalyptus grandis
Eucgr.A01019
I
0.000
Eucgr.A02441
Eucalyptus grandis
Eucgr.A02441
I
0.000
Eucgr.H04114
Eucalyptus grandis
Eucgr.H04114
I
0.000
Eucgr.K01828
Eucalyptus grandis
Eucgr.K01828
I
0.000
Thhalv10001295m.g
Eutrema salsugineum
Thhalv10001295m.g
I
0.000
gene22660-v1.0-hybrid
Fragaria vesca
gene22660-v1.0-hybrid
I
0.000
gene22889-v1.0-hybrid
Fragaria vesca
gene22889-v1.0-hybrid
I
0.000
GLYMA01G15134
Glycine max
GLYMA01G15134
I
0.000
GLYMA02G01160
Glycine max
GLYMA02G01160
I
0.000
GLYMA02G30670
Glycine max
GLYMA02G30670
I
0.000
GLYMA03G29901
Glycine max
GLYMA03G29901
I
0.000
GLYMA06G36140
Glycine max
GLYMA06G36140
I
0.000
GLYMA09G09790
Glycine max
GLYMA09G09790
I
0.000
GLYMA10G01211
Glycine max
GLYMA10G01211
I
0.000
GLYMA11G16556
Glycine max
GLYMA11G16556
I
0.000
GLYMA12G27330
Glycine max
GLYMA12G27330
I
0.000
GLYMA15G21860
Glycine max
GLYMA15G21860
I
0.000
GLYMA18G36960
Glycine max
GLYMA18G36960
I
0.000
GLYMA19G32800
Glycine max
GLYMA19G32800
I
0.000
Gorai.002G156700
Gossypium raimondii
Gorai.002G156700
I
0.000
Gorai.006G066700
Gossypium raimondii
Gorai.006G066700
I
0.000
Gorai.007G087900
Gossypium raimondii
Gorai.007G087900
I
0.000
Gorai.007G116100
Gossypium raimondii
Gorai.007G116100
I
0.000
Gorai.007G362000
Gossypium raimondii
Gorai.007G362000
I
0.000
Gorai.008G135700
Gossypium raimondii
Gorai.008G135700
I
0.000
Gorai.013G169800
Gossypium raimondii
Gorai.013G169800
I
0.000
MLOC_4830
Hordeum vulgare
MLOC_4830
I
0.000
LPERR03G34030
Leersia perrieri
LPERR03G34030
I
0.000
LPERR04G17030
Leersia perrieri
LPERR04G17030
I
0.000
LPERR08G16940
Leersia perrieri
LPERR08G16940
I
0.000
LPERR09G10900
Leersia perrieri
LPERR09G10900
I
0.000
Lus10004523.g
Linum usitatissimum
Lus10004523.g
I
0.000
Lus10010071.g
Linum usitatissimum
Lus10010071.g
I
0.000
Lus10012020.g
Linum usitatissimum
Lus10012020.g
I
0.000
Lus10016275.g
Linum usitatissimum
Lus10016275.g
I
0.000
Lus10021034.g
Linum usitatissimum
Lus10021034.g
I
0.000
Lus10023818.g
Linum usitatissimum
Lus10023818.g
I
0.000
chr1.CM0122.330.nc
Lotus japonicus
chr1.CM0122.330.nc
I
0.000
chr3.CM0282.980.nc
Lotus japonicus
chr3.CM0282.980.nc
I
0.000
chr5.CM0158.110.nc
Lotus japonicus
chr5.CM0158.110.nc
I
0.000
MDP0000156994
Malus domestica
MDP0000156994
I
0.000
MDP0000180408
Malus domestica
MDP0000180408
I
0.000
MDP0000180409
Malus domestica
MDP0000180409
I
0.000
MDP0000262141
Malus domestica
MDP0000262141
I
0.000
MDP0000297978
Malus domestica
MDP0000297978
I
0.000
MDP0000589558
Malus domestica
MDP0000589558
I
0.000
MDP0000861601
Malus domestica
MDP0000861601
I
0.000
MDP0000919693
Malus domestica
MDP0000919693
I
0.000
MDP0000919694
Malus domestica
MDP0000919694
I
0.000
cassava17741.valid.m1
Manihot esculenta
cassava17741.valid.m1
I
0.000
cassava29736.valid.m1
Manihot esculenta
cassava29736.valid.m1
I
0.000
cassava36085.valid.m1
Manihot esculenta
cassava36085.valid.m1
I
0.000
cassava37839.valid.m1
Manihot esculenta
cassava37839.valid.m1
I
0.000
MTR_1g053715
Medicago truncatula
MTR_1g053715
I
0.000
MTR_1g086250
Medicago truncatula
MTR_1g086250
I
0.000
MTR_7g092930
Medicago truncatula
MTR_7g092930
I
0.000
MTR_7g444860
Medicago truncatula
MTR_7g444860
I
0.000
MTR_8g463140
Medicago truncatula
MTR_8g463140
I
0.000
mgf001202m
Mimulus guttatus
mgf001202m
I
0.000
mgf001295m
Mimulus guttatus
mgf001295m
I
0.000
mgf009459m
Mimulus guttatus
mgf009459m
I
0.000
mgf012995m
Mimulus guttatus
mgf012995m
I
0.000
mgf025134m
Mimulus guttatus
mgf025134m
I
0.000
GSMUA_Achr2G01820_001
Musa acuminata
GSMUA_Achr2G01820_001
I
0.000
GSMUA_Achr3G11170_001
Musa acuminata
GSMUA_Achr3G11170_001
I
0.000
GSMUA_Achr3G24520_001
Musa acuminata
GSMUA_Achr3G24520_001
I
0.000
GSMUA_Achr4G03880_001
Musa acuminata
GSMUA_Achr4G03880_001
I
0.000
GSMUA_Achr5G22250_001
Musa acuminata
GSMUA_Achr5G22250_001
I
0.000
GSMUA_Achr5G27280_001
Musa acuminata
GSMUA_Achr5G27280_001
I
0.000
GSMUA_Achr6G22280_001
Musa acuminata
GSMUA_Achr6G22280_001
I
0.000
GSMUA_Achr7G02020_001
Musa acuminata
GSMUA_Achr7G02020_001
I
0.000
GSMUA_Achr7G20510_001
Musa acuminata
GSMUA_Achr7G20510_001
I
0.000
GSMUA_Achr8G25550_001
Musa acuminata
GSMUA_Achr8G25550_001
I
0.000
GSMUA_Achr9G22260_001
Musa acuminata
GSMUA_Achr9G22260_001
I
0.000
GSMUA_Achr9G27660_001
Musa acuminata
GSMUA_Achr9G27660_001
I
0.000
OBART03G39900
Oryza barthii
OBART03G39900
I
0.000
OBART04G20940
Oryza barthii
OBART04G20940
I
0.000
OBART07G15570
Oryza barthii
OBART07G15570
I
0.000
OBART08G20010
Oryza barthii
OBART08G20010
N
0.000
OBART09G14800
Oryza barthii
OBART09G14800
I
0.000
OB03G47050
Oryza brachyantha
OB03G47050
I
0.000
OB04G27960
Oryza brachyantha
OB04G27960
I
0.000
OB08G26920
Oryza brachyantha
OB08G26920
I
0.000
OB08G27190
Oryza brachyantha
OB08G27190
I
0.000
OB09G21350
Oryza brachyantha
OB09G21350
N
0.000
ORGLA03G0367800
Oryza glaberrima
ORGLA03G0367800
I
0.000
ORGLA04G0180000
Oryza glaberrima
ORGLA04G0180000
I
0.000
ORGLA08G0176500
Oryza glaberrima
ORGLA08G0176500
I
0.000
ORGLA09G0114000
Oryza glaberrima
ORGLA09G0114000
I
0.000
OGLUM03G39810
Oryza glumaepatula
OGLUM03G39810
I
0.000
OGLUM04G20870
Oryza glumaepatula
OGLUM04G20870
I
0.000
OGLUM07G15250
Oryza glumaepatula
OGLUM07G15250
I
0.000
OGLUM08G21260
Oryza glumaepatula
OGLUM08G21260
I
0.000
OGLUM09G15430
Oryza glumaepatula
OGLUM09G15430
I
0.000
BGIOSGA016888
Oryza indica
BGIOSGA016888
I
0.000
BGIOSGA024253
Oryza indica
BGIOSGA024253
I
0.000
BGIOSGA029541
Oryza indica
BGIOSGA029541
I
0.000
OLONG_015903
Oryza longistaminata
OLONG_015903
N
0.000
OLONG_020138
Oryza longistaminata
OLONG_020138
N
0.000
OMERI03G36740
Oryza meridionalis
OMERI03G36740
I
0.000
OMERI04G17360
Oryza meridionalis
OMERI04G17360
I
0.000
OMERI07G12270
Oryza meridionalis
OMERI07G12270
I
0.000
OMERI09G11520
Oryza meridionalis
OMERI09G11520
I
0.000
ONIVA03G41820
Oryza nivara
ONIVA03G41820
I
0.000
ONIVA04G19190
Oryza nivara
ONIVA04G19190
I
0.000
ONIVA07G14170
Oryza nivara
ONIVA07G14170
I
0.000
ONIVA08G22610
Oryza nivara
ONIVA08G22610
I
0.000
ONIVA09G15400
Oryza nivara
ONIVA09G15400
I
0.000
OPUNC03G37130
Oryza punctata
OPUNC03G37130
I
0.000
OPUNC03G37170
Oryza punctata
OPUNC03G37170
I
0.000
OPUNC04G18620
Oryza punctata
OPUNC04G18620
I
0.000
OPUNC08G18140
Oryza punctata
OPUNC08G18140
I
0.000
ORUFI03G41710
Oryza rufipogon
ORUFI03G41710
I
0.000
ORUFI04G22540
Oryza rufipogon
ORUFI04G22540
I
0.000
ORUFI07G16070
Oryza rufipogon
ORUFI07G16070
I
0.000
ORUFI08G22440
Oryza rufipogon
ORUFI08G22440
I
0.000
ORUFI09G15960
Oryza rufipogon
ORUFI09G15960
I
0.000
SPL6
Oryza sativa
OS03G0833300
I
0.000
SPL7
Oryza sativa
OS04G0551500
I
0.000
SPL14
Oryza sativa
OS08G0509600
I
0.000
OS09G0491532
Oryza sativa
OS09G0491532
I
0.000
Pavir.Ba01711
Panicum virgatum
Pavir.Ba01711
I
0.000
Pavir.Fb01946
Panicum virgatum
Pavir.Fb01946
I
0.000
Pavir.Ia00235
Panicum virgatum
Pavir.Ia00235
I
0.000
Pavir.J01500
Panicum virgatum
Pavir.J01500
I
0.000
Pavir.J11258
Panicum virgatum
Pavir.J11258
I
0.000
estExt_fgenesh1_pg.C_1940032
Physcomitrella patens
estExt_fgenesh1_pg.C_1940032
I
0.000
estExt_fgenesh1_pg.C_1940033
Physcomitrella patens
estExt_fgenesh1_pg.C_1940033
D
0.000
fgenesh1_pg.scaffold_50000083
Physcomitrella patens
fgenesh1_pg.scaffold_50000083
I
0.000
POPTR_0001s40870
Populus trichocarpa
POPTR_0001s40870
I
0.000
POPTR_0002s14330
Populus trichocarpa
POPTR_0002s14330
I
0.000
POPTR_0002s18970
Populus trichocarpa
POPTR_0002s18970
I
0.000
POPTR_0011s11770
Populus trichocarpa
POPTR_0011s11770
I
0.000
POPTR_0014s05690
Populus trichocarpa
POPTR_0014s05690
I
0.000
POPTR_0014s10960
Populus trichocarpa
POPTR_0014s10960
I
0.000
Pm002693
Prunus mume
Pm002693
I
0.000
Pm007035
Prunus mume
Pm007035
I
0.000
Pm008474
Prunus mume
Pm008474
I
0.000
Pm008475
Prunus mume
Pm008475
I
0.000
Pm017778
Prunus mume
Pm017778
I
0.000
PRUPE_ppa000690mg
Prunus persica
PRUPE_ppa000690mg
I
0.000
PRUPE_ppa000792mg
Prunus persica
PRUPE_ppa000792mg
I
0.000
PRUPE_ppa007056mg
Prunus persica
PRUPE_ppa007056mg
I
0.000
PRUPE_ppa021582mg
Prunus persica
PRUPE_ppa021582mg
I
0.000
PRUPE_ppa023657mg
Prunus persica
PRUPE_ppa023657mg
I
0.000
PRUPE_ppa024285mg
Prunus persica
PRUPE_ppa024285mg
I
0.000
28211.m000132
Ricinus communis
28211.m000132
I
0.000
29269.m000250
Ricinus communis
29269.m000250
I
0.000
29889.m003388
Ricinus communis
29889.m003388
I
0.000
30076.m004574
Ricinus communis
30076.m004574
I
0.000
30174.m008805
Ricinus communis
30174.m008805
I
0.000
SapurV1A.0014s0380
Salix purpurea
SapurV1A.0014s0380
I
0.000
SapurV1A.0018s0470
Salix purpurea
SapurV1A.0018s0470
I
0.000
SapurV1A.0033s0320
Salix purpurea
SapurV1A.0033s0320
I
0.000
SapurV1A.0156s0200
Salix purpurea
SapurV1A.0156s0200
I
0.000
SapurV1A.0294s0270
Salix purpurea
SapurV1A.0294s0270
I
0.000
SapurV1A.1264s0060
Salix purpurea
SapurV1A.1264s0060
I
0.000
SELMODRAFT_437670
Selaginella moellendorffii
SELMODRAFT_437670
I
0.000
SELMODRAFT_445524
Selaginella moellendorffii
SELMODRAFT_445524
I
0.000
Si013870m.g
Setaria italica
Si013870m.g
I
0.000
Si030195m.g
Setaria italica
Si030195m.g
I
0.000
Si034095m.g
Setaria italica
Si034095m.g
I
0.000
Solyc01g068100.2
Solanum lycopersicum
Solyc01g068100.2
I
0.000
Solyc10g078700.1
Solanum lycopersicum
Solyc10g078700.1
I
0.000
PGSC0003DMG400005196
Solanum tuberosum
PGSC0003DMG400005196
I
0.000
PGSC0003DMG400011433
Solanum tuberosum
PGSC0003DMG400011433
I
0.000
Sb01g002530
Sorghum bicolor
Sb01g002530
I
0.000
Sb02g028420
Sorghum bicolor
Sb02g028420
I
0.000
Sb07g027740
Sorghum bicolor
Sb07g027740
I
0.000
TCM_004922
Theobroma cacao
TCM_004922
I
0.000
TCM_005620
Theobroma cacao
TCM_005620
I
0.000
TCM_021482
Theobroma cacao
TCM_021482
I
0.000
TCM_024873
Theobroma cacao
TCM_024873
I
0.000
TCM_031595
Theobroma cacao
TCM_031595
I
0.000
Traes_4AL_5062917C4
Triticum aestivum
Traes_4AL_5062917C4
I
0.000
Traes_5BL_3503725F1
Triticum aestivum
Traes_5BL_3503725F1
I
0.000
Traes_5BL_96D5EA4EE
Triticum aestivum
Traes_5BL_96D5EA4EE
I
0.000
Traes_5DL_3CDCC5DFF
Triticum aestivum
Traes_5DL_3CDCC5DFF
I
0.000
Traes_7DS_E2A582546
Triticum aestivum
Traes_7DS_E2A582546
N
0.000
TRIUR3_23872
Triticum urartu
TRIUR3_23872
I
0.000
TRIUR3_33729
Triticum urartu
TRIUR3_33729
I
0.000
VIT_05s0020g00700
Vitis vinifera
VIT_05s0020g00700
I
0.000
VIT_07s0005g02260
Vitis vinifera
VIT_07s0005g02260
I
0.000
VIT_08s0007g06270
Vitis vinifera
VIT_08s0007g06270
I
0.000
VIT_15s0021g02290
Vitis vinifera
VIT_15s0021g02290
I
0.000
VIT_18s0122g00380
Vitis vinifera
VIT_18s0122g00380
I
0.000
GRMZM2G126018
Zea mays
GRMZM2G126018
I
0.000
GRMZM2G156756
Zea mays
GRMZM2G156756
I
0.000
GRMZM2G160917
Zea mays
GRMZM2G160917
I
0.000
GRMZM2G307588
Zea mays
GRMZM2G307588
I
0.000
GRMZM2G460544
Zea mays
GRMZM2G460544
N
0.000