CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
M437DRAFT_82573
(
Aureobasidium melanogenum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
M437DRAFT_82573
T220365_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN
NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.736
0.772
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR
YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.622
0.439
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR
YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.622
0.439
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.622
0.439
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.622
0.439
yox1
M02174_2.00
Schizosaccharomyces pombe
NNHHATDDNN
NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6057
0.615
0.386
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEQ64559
Homeodomain
71
127
RQKRRRTSPDDQKILEEAYAKNSKPDKATRMDIVSRVALGEKEVQIWFQNRRQSSRR
Links
Other
Homeodomain
family TFs
Other
Aureobasidium melanogenum
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_14547
Aegilops tauschii
F775_14547
N
0.000
F775_20324
Aegilops tauschii
F775_20324
N
0.000
Cagra.2428s0008
Capsella grandiflora
Cagra.2428s0008
N
0.000
Cucsa.140430
Cucumis sativus
Cucsa.140430
N
0.000
GLYMA14G09231
Glycine max
GLYMA14G09231
I
0.000
GLYMA17G21573
Glycine max
GLYMA17G21573
I
0.000
GLYMA17G35951
Glycine max
GLYMA17G35951
I
0.000
Lus10018724.g
Linum usitatissimum
Lus10018724.g
N
0.000
Lus10036286.g
Linum usitatissimum
Lus10036286.g
N
0.000
mgf017216m
Mimulus guttatus
mgf017216m
N
0.000
mgf025738m
Mimulus guttatus
mgf025738m
N
0.000
GSMUA_Achr9G11300_001
Musa acuminata
GSMUA_Achr9G11300_001
N
0.000
OBART02G35840
Oryza barthii
OBART02G35840
N
0.000
OB02G42630
Oryza brachyantha
OB02G42630
N
0.000
OB12G25120
Oryza brachyantha
OB12G25120
N
0.000
ORGLA05G0025000
Oryza glaberrima
ORGLA05G0025000
N
0.000
OGLUM03G27730
Oryza glumaepatula
OGLUM03G27730
I
0.000
OGLUM05G02640
Oryza glumaepatula
OGLUM05G02640
I
0.000
BGIOSGA009202
Oryza indica
BGIOSGA009202
N
0.000
OLONG_013198
Oryza longistaminata
OLONG_013198
I
0.000
OLONG_008235
Oryza longistaminata
OLONG_008235
N
0.000
OLONG_003839
Oryza longistaminata
OLONG_003839
N
0.000
OMERI05G02570
Oryza meridionalis
OMERI05G02570
I
0.000
ONIVA10G20730
Oryza nivara
ONIVA10G20730
N
0.000
OPUNC09G08950
Oryza punctata
OPUNC09G08950
N
0.000
OPUNC01G09800
Oryza punctata
OPUNC01G09800
N
0.000
OPUNC06G04110
Oryza punctata
OPUNC06G04110
N
0.000
ORUFI10G19390
Oryza rufipogon
ORUFI10G19390
N
0.000
Pavir.J12143
Panicum virgatum
Pavir.J12143
I
0.000
Pavir.Ca01237
Panicum virgatum
Pavir.Ca01237
I
0.000
Pm026389
Prunus mume
Pm026389
I
0.000
Pm005303
Prunus mume
Pm005303
N
0.000
PRUPE_ppa021918mg
Prunus persica
PRUPE_ppa021918mg
I
0.000
PRUPE_ppa014897mg
Prunus persica
PRUPE_ppa014897mg
I
0.000
Traes_6AS_E0A257EEA
Triticum aestivum
Traes_6AS_E0A257EEA
N
0.000
Traes_4BL_37108D17C
Triticum aestivum
Traes_4BL_37108D17C
N
0.000
TRIUR3_33471
Triticum urartu
TRIUR3_33471
N
0.000
TRIUR3_26354
Triticum urartu
TRIUR3_26354
N
0.000
TRIUR3_25332
Triticum urartu
TRIUR3_25332
N
0.000
TRIUR3_21181
Triticum urartu
TRIUR3_21181
N
0.000
AC177924.2_FG001
Zea mays
AC177924.2_FG001
N
0.000
GRMZM2G316758
Zea mays
GRMZM2G316758
N
0.000