CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra82440
(
Phytophthora ramorum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Phyra82440
T222363_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra82440
Homeodomain
244
304
PKKRSSLSKLSKQLMHDWFEHNLHHPYPTEEEKEWLAQQGGITLEQVNNWFINTRGRKWKP
Links
Other
Homeodomain
family TFs
Other
Phytophthora ramorum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_090460
Albugo laibachii
ALNC14_090460
N
0.647
HpaG808391
Hyaloperonospora arabidopsidis
HpaG808391
N
0.788
HpaG810880
Hyaloperonospora arabidopsidis
HpaG810880
N
0.853
e_gw1.14.373.1
Phytophthora capsici
e_gw1.14.373.1
N
0.853
PITG_01080
Phytophthora infestans
PITG_01080
N
0.853
fgenesh_scip_prom.28083.4934
Phytophthora lateralis
fgenesh_scip_prom.28083.4934
N
0.867
F443_05686
Phytophthora parasitica
F443_05686
N
0.853
Physo127243
Phytophthora sojae
Physo127243
N
0.855
maker-par_contig_875-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_875-fgenesh-gene-0.0
N
0.675
maker-pir_contig_454-snap-gene-0.16
Pythium irregulare
maker-pir_contig_454-snap-gene-0.16
N
0.635
PYU1_G001783
Pythium ultimum
PYU1_G001783
N
0.628
maker-pve_contig_661-fgenesh-gene-0.6
Pythium vexans
maker-pve_contig_661-fgenesh-gene-0.6
N
0.661