SCHCODRAFT_238623 (Schizophyllum commune)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SCHCODRAFT_238623 T223046_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.626 0.421
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.626 0.421
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.626 0.421
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.626 0.421
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.605 0.386
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.605 0.386
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.605 0.386
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.605 0.386
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFI91523 Homeodomain 46 102

Links

Other Homeodomain family TFs
Other Schizophyllum commune TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ASIM_0000114801 Anisakis simplex ASIM_0000114801 N 0.000
ALUE_0001798401 Ascaris lumbricoides ALUE_0001798401 N 0.000
ASU_13985 Ascaris suum ASU_13985 N 0.000
Bm2524 Brugia malayi Bm2524 N 0.000
CBN25379 Caenorhabditis brenneri CBN25379 I 0.000
CBG04066 Caenorhabditis briggsae CBG04066 N 0.000
CJA19030 Caenorhabditis japonica CJA19030 N 0.000
CRE03995 Caenorhabditis remanei CRE03995 N 0.000
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.000
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.000
EVEC_0000195001 Enterobius vermicularis EVEC_0000195001 N 0.000
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.000
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.000
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N 0.000
LOAG_04347 Loa loa LOAG_04347 N 0.000
Minc10016 Meloidogyne incognita Minc10016 N 0.000
Minc01744 Meloidogyne incognita Minc01744 N 0.000
ML09221a Mnemiopsis leidyi ML09221a N 0.000
MDOA007633 Musca domestica MDOA007633 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.000
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.000
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.000
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.000
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.000
PPA06513 Pristionchus pacificus PPA06513 N 0.000
L596_g20063 Steinernema carpocapsae L596_g20063 N 0.000
L889_g13720 Steinernema feltiae L889_g13720 N 0.000
L893_g3116 Steinernema glaseri L893_g3116 N 0.000
L898_g26664 Steinernema monticolum L898_g26664 N 0.000
L892_g26355 Steinernema scapterisci L892_g26355 N 0.000
L892_g15959 Steinernema scapterisci L892_g15959 N 0.000
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.000
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.000
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.000
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.000
SMUV_0000856901 Syphacia muris SMUV_0000856901 N 0.000
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.000
TCLT_0000097001 Thelazia callipaeda TCLT_0000097001 N 0.000
TCNE_0001783901 Toxocara canis TCNE_0001783901 N 0.000
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.000