CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_01743
(
Sordaria macrospora
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SMAC_01743
T223350_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_17152
M02135_2.00
Fusarium graminearum
CATGTCAW
WTGACATG
PBM
Weirauch et al.(2014)
pTH6014
0.612
0.611
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC08194
Homeodomain
161
217
NGRFSRESIKILKSWLSTHHKHPYPNDEEKEMLQKQTGLNKTQITGWLANARRRRGK
Links
Other
Homeodomain
family TFs
Other
Sordaria macrospora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
YPR196W
Saccharomyces cerevisiae
YPR196W
D
SKUD_144802
Saccharomyces kudriavzevii
SKUD_144802
I
SKUD_186105
Saccharomyces kudriavzevii
SKUD_186105
I
8988_Multiple
Saccharomyces mikatae
8988_Multiple
I
8996_Multiple
Saccharomyces mikatae
8996_Multiple
I
22689_YPR196W
Saccharomyces paradoxus
22689_YPR196W
I
9515_Multiple
Saccharomyces paradoxus
9515_Multiple
I
9523_Multiple
Saccharomyces paradoxus
9523_Multiple
I